Information for 4-GCAAACTGTGCAAAGT (Motif 9)

C T A G A T G C G T C A C T G A G T C A A G T C C G A T A C T G C A G T A C T G A G T C C G T A C T G A C G T A A T C G C G A T
Reverse Opposite:
C G T A A T G C A C G T A G C T C G A T A C T G A G T C G T C A G T A C C G T A C T A G C A G T A G C T A C G T A T C G A G T C
p-value:1e-11
log p-value:-2.667e+01
Information Content per bp:1.790
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.5 +/- 18.9bp
Average Position of motif in Background13.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCAAACTGTGCAAAGT
--WDNCTGGGCA----
 C T A G A T G C G T C A C T G A G T C A A G T C C G A T A C T G C A G T A C T G A G T C C G T A C T G A C G T A A T C G C G A T
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCAAACTGTGCAAAGT--
-NNNVCTGWGYAAACASN
 C T A G A T G C G T C A C T G A G T C A A G T C C G A T A C T G C A G T A C T G A G T C C G T A C T G A C G T A A T C G C G A T A C G T A C G T
A C G T A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GCAAACTGTGCAAAGT
----NNTTGGCANN--
 C T A G A T G C G T C A C T G A G T C A A G T C C G A T A C T G C A G T A C T G A G T C C G T A C T G A C G T A A T C G C G A T
A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCAAACTGTGCAAAGT---
--TACATGTGCACATAAAA
 C T A G A T G C G T C A C T G A G T C A A G T C C G A T A C T G C A G T A C T G A G T C C G T A C T G A C G T A A T C G C G A T A C G T A C G T A C G T
A C G T A C G T C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0044.1_Mtf1_1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCAAACTGTGCAAAGT
GGGCCGTGTGCAAAAA
 C T A G A T G C G T C A C T G A G T C A A G T C C G A T A C T G C A G T A C T G A G T C C G T A C T G A C G T A A T C G C G A T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GCAAACTGTGCAAAGT
-AAATCACTGC-----
 C T A G A T G C G T C A C T G A G T C A A G T C C G A T A C T G C A G T A C T G A G T C C G T A C T G A C G T A A T C G C G A T
A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T A C G T

MTF1/MA0863.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCAAACTGTGCAAAGT
GTGCCGTGTGCAAA--
 C T A G A T G C G T C A C T G A G T C A A G T C C G A T A C T G C A G T A C T G A G T C C G T A C T G A C G T A A T C G C G A T
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GCAAACTGTGCAAAGT
-----CTTGGCAA---
 C T A G A T G C G T C A C T G A G T C A A G T C C G A T A C T G C A G T A C T G A G T C C G T A C T G A C G T A A T C G C G A T
A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T

PB0161.1_Rxra_2/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GCAAACTGTGCAAAGT
NNNNCAACCTTCGNGA---
 A C G T A C G T A C G T C T A G A T G C G T C A C T G A G T C A A G T C C G A T A C T G C A G T A C T G A G T C C G T A C T G A C G T A A T C G C G A T
G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GCAAACTGTGCAAAGT
-----ATATGCAAAT-
 C T A G A T G C G T C A C T G A G T C A A G T C C G A T A C T G C A G T A C T G A G T C C G T A C T G A C G T A A T C G C G A T
A C G T A C G T A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T