Information for 3-HTCCATTTTTTTCCAT (Motif 8)

G C A T A C G T A G T C A G T C C G T A A C G T A C G T A C G T A G C T C G A T A G C T A C G T A G T C A G T C G C T A A G C T
Reverse Opposite:
T C G A C G A T A C T G C T A G C G T A C T G A C G T A C T G A G T C A C G T A C G T A A C G T C T A G A C T G G T C A C G T A
p-value:1e-11
log p-value:-2.667e+01
Information Content per bp:1.825
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.7 +/- 28.6bp
Average Position of motif in Background86.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:HTCCATTTTTTTCCAT--
----TTTTTTTTCNNGTN
 G C A T A C G T A G T C A G T C C G T A A C G T A C G T A C G T A G C T C G A T A G C T A C G T A G T C A G T C G C T A A G C T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:HTCCATTTTTTTCCAT
--CCATTGTTYB----
 G C A T A C G T A G T C A G T C C G T A A C G T A C G T A C G T A G C T C G A T A G C T A C G T A G T C A G T C G C T A A G C T
A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.61
Offset:7
Orientation:forward strand
Alignment:HTCCATTTTTTTCCAT-
-------ATTTTCCATT
 G C A T A C G T A G T C A G T C C G T A A C G T A C G T A C G T A G C T C G A T A G C T A C G T A G T C A G T C G C T A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.60
Offset:7
Orientation:forward strand
Alignment:HTCCATTTTTTTCCAT-
-------ATTTTCCATT
 G C A T A C G T A G T C A G T C C G T A A C G T A C G T A C G T A G C T C G A T A G C T A C G T A G T C A G T C G C T A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.60
Offset:7
Orientation:forward strand
Alignment:HTCCATTTTTTTCCAT-
-------ATTTTCCATT
 G C A T A C G T A G T C A G T C C G T A A C G T A C G T A C G T A G C T C G A T A G C T A C G T A G T C A G T C G C T A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:HTCCATTTTTTTCCAT
--CCATTGTTTT----
 G C A T A C G T A G T C A G T C C G T A A C G T A C G T A C G T A G C T C G A T A G C T A C G T A G T C A G T C G C T A A G C T
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--HTCCATTTTTTTCCAT
CCTTGCAATTTTTNN---
 A C G T A C G T G C A T A C G T A G T C A G T C C G T A A C G T A C G T A C G T A G C T C G A T A G C T A C G T A G T C A G T C G C T A A G C T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--HTCCATTTTTTTCCAT
GCNGCCATCTTG------
 A C G T A C G T G C A T A C G T A G T C A G T C C G T A A C G T A C G T A C G T A G C T C G A T A G C T A C G T A G T C A G T C G C T A A G C T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.59
Offset:8
Orientation:forward strand
Alignment:HTCCATTTTTTTCCAT
--------TTTTCCA-
 G C A T A C G T A G T C A G T C C G T A A C G T A C G T A C G T A G C T C G A T A G C T A C G T A G T C A G T C G C T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:HTCCATTTTTTTCCAT
-NCCATTGTTC-----
 G C A T A C G T A G T C A G T C C G T A A C G T A C G T A C G T A G C T C G A T A G C T A C G T A G T C A G T C G C T A A G C T
A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T A C G T A C G T