Information for 4-CCCTCCTGGCCTC (Motif 5)

A G T C G T A C A G T C C G A T A T G C A G T C C G A T A C T G T C A G A T G C A G T C A G C T A G T C
Reverse Opposite:
A C T G C T G A C T A G A T C G A G T C T G A C C G T A A C T G T A C G C G T A C T A G A C T G C T A G
p-value:1e-12
log p-value:-2.981e+01
Information Content per bp:1.773
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.24%
Number of Background Sequences with motif18.0
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets45.0 +/- 25.1bp
Average Position of motif in Background52.8 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:1
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CCCTCCTGGCCTC-
CCTTCCTTCCTTCCTTCC
 A C G T A C G T A C G T A C G T A G T C G T A C A G T C C G A T A T G C A G T C C G A T A C T G T C A G A T G C A G T C A G C T A G T C A C G T
A G T C G A T C G A C T C A G T A T G C A G T C A C G T A C G T A T G C G T A C A G C T A G C T G A T C A G T C A G C T A G C T A G T C A G T C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCCTGGCCTC
CCCCCTGCTGTG---
 A C G T A C G T A G T C G T A C A G T C C G A T A T G C A G T C C G A T A C T G T C A G A T G C A G T C A G C T A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCCTCCTGGCCTC--
WCATTTTGKCCTCYT
 A G T C G T A C A G T C C G A T A T G C A G T C C G A T A C T G T C A G A T G C A G T C A G C T A G T C A C G T A C G T
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCCTCCTGGCCTC
CCCCCTTGGGCCCC
 A C G T A G T C G T A C A G T C C G A T A T G C A G T C C G A T A C T G T C A G A T G C A G T C A G C T A G T C
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCCTCCTGGCCTC
GGCCYCCTGCTGDGH--
 A C G T A C G T A C G T A C G T A G T C G T A C A G T C C G A T A T G C A G T C C G A T A C T G T C A G A T G C A G T C A G C T A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CCCTCCTGGCCTC-
------TGACCTYA
 A G T C G T A C A G T C C G A T A T G C A G T C C G A T A C T G T C A G A T G C A G T C A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCCTGGCCTC
TGACCTTTTGACCTC
 A C G T A C G T A G T C G T A C A G T C C G A T A T G C A G T C C G A T A C T G T C A G A T G C A G T C A G C T A G T C
A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CCCTCCTGGCCTC
----CNAGGCCT-
 A G T C G T A C A G T C C G A T A T G C A G T C C G A T A C T G T C A G A T G C A G T C A G C T A G T C
A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCCTCCTGGCCTC
CCTCACCTG-----
 A C G T A G T C G T A C A G T C C G A T A T G C A G T C C G A T A C T G T C A G A T G C A G T C A G C T A G T C
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CCCTCCTGGCCTC--
--CNNTTGACCTTTG
 A G T C G T A C A G T C C G A T A T G C A G T C C G A T A C T G T C A G A T G C A G T C A G C T A G T C A C G T A C G T
A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G