Information for 2-CACTCTTAGCCAG (Motif 2)

A T G C C G T A A G T C A C G T A G T C C G A T C A G T C G T A A C T G A G T C G T A C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C T G T A G C A C G T G C T A C G T A C T A G C G T A T C A G C G A T A T C G
p-value:1e-16
log p-value:-3.740e+01
Information Content per bp:1.815
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.9 +/- 21.7bp
Average Position of motif in Background94.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CACTCTTAGCCAG---
------ATGCCAGACN
 A T G C C G T A A G T C A C G T A G T C C G A T C A G T C G T A A C T G A G T C G T A C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

RHOXF1/MA0719.1/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CACTCTTAGCCAG
----ATAATCCC-
 A T G C C G T A A G T C A C G T A G T C C G A T C A G T C G T A A C T G A G T C G T A C C G T A A C T G
A C G T A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T

PB0023.1_Gata6_1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CACTCTTAGCCAG---
NNANTCTTATCTNNNNN
 A C G T A T G C C G T A A G T C A C G T A G T C C G A T C A G T C G T A A C T G A G T C G T A C C G T A A C T G A C G T A C G T A C G T
A G T C C G T A G C T A G A C T A C G T A T G C C G A T C G A T C T G A C G A T G T A C C G A T G T A C A C G T G C T A C A G T G C T A

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:CACTCTTAGCCAG
-------TGCCAA
 A T G C C G T A A G T C A C G T A G T C C G A T C A G T C G T A A C T G A G T C G T A C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

PH0040.1_Hmbox1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CACTCTTAGCCAG-----
-GANGTTAACTAGTTTNN
 A T G C C G T A A G T C A C G T A G T C C G A T C A G T C G T A A C T G A G T C G T A C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CACTCTTAGCCAG---
----ACTAGCCAATCA
 A T G C C G T A A G T C A C G T A G T C C G A T C A G T C G T A A C T G A G T C G T A C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:7
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CACTCTTAGCCAG-
--TGCTGASTCAGC
 A T G C C G T A A G T C A C G T A G T C C G A T C A G T C G T A A C T G A G T C G T A C C G T A A C T G A C G T
A C G T A C G T A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CACTCTTAGCCAG-
-----CGTGCCAAG
 A T G C C G T A A G T C A C G T A G T C C G A T C A G T C G T A A C T G A G T C G T A C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

GATA3/MA0037.2/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CACTCTTAGCCAG
---TCTTATCT--
 A T G C C G T A A G T C A C G T A G T C C G A T C A G T C G T A A C T G A G T C G T A C C G T A A C T G
A C G T A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CACTCTTAGCCAG
AAATCACTGC---
 A T G C C G T A A G T C A C G T A G T C C G A T C A G T C G T A A C T G A G T C G T A C C G T A A C T G
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T