Information for 4-TTKATTTGMYTYCAGK (Motif 7)

C G A T A C G T A C G T C G T A A C G T A C G T A C G T A C T G G T C A A G C T A C G T A G C T A G T C C G T A A C T G A C T G
Reverse Opposite:
G T A C A G T C A C G T A C T G T C A G C G T A C T G A A C G T G T A C C G T A C G T A C G T A A C G T G T C A C G T A C G T A
p-value:1e-11
log p-value:-2.660e+01
Information Content per bp:1.864
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.8 +/- 10.0bp
Average Position of motif in Background77.0 +/- 9.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTKATTTGMYTYCAGK--
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T C G A T A C G T A C G T C G T A A C G T A C G T A C G T A C T G G T C A A G C T A C G T A G C T A G T C C G T A A C T G A C T G A C G T A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTKATTTGMYTYCAGK--
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T C G A T A C G T A C G T C G T A A C G T A C G T A C G T A C T G G T C A A G C T A C G T A G C T A G T C C G T A A C T G A C T G A C G T A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

PH0144.1_Pou2f2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTKATTTGMYTYCAGK
TNTAATTTGCATANNN-
 A C G T C G A T A C G T A C G T C G T A A C G T A C G T A C G T A C T G G T C A A G C T A C G T A G C T A G T C C G T A A C T G A C T G
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TTKATTTGMYTYCAGK
NNAATTTTATTGGNTN-----
 A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G T A A C G T A C G T A C G T A C T G G T C A A G C T A C G T A G C T A G T C C G T A A C T G A C T G
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTKATTTGMYTYCAGK
TNTAATTTGCATACNA-
 A C G T C G A T A C G T A C G T C G T A A C G T A C G T A C G T A C T G G T C A A G C T A C G T A G C T A G T C C G T A A C T G A C T G
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTKATTTGMYTYCAGK
TNTAATTTGCATACNA-
 A C G T C G A T A C G T A C G T C G T A A C G T A C G T A C G T A C T G G T C A A G C T A C G T A G C T A G T C C G T A A C T G A C T G
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTKATTTGMYTYCAGK
TTTTTATTGG--------
 A C G T A C G T C G A T A C G T A C G T C G T A A C G T A C G T A C G T A C T G G T C A A G C T A C G T A G C T A G T C C G T A A C T G A C T G
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTKATTTGMYTYCAGK
NTTTTATTGG--------
 A C G T A C G T C G A T A C G T A C G T C G T A A C G T A C G T A C G T A C T G G T C A A G C T A C G T A G C T A G T C C G T A A C T G A C T G
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTKATTTGMYTYCAGK
TTCATTTGCATAT---
 C G A T A C G T A C G T C G T A A C G T A C G T A C G T A C T G G T C A A G C T A C G T A G C T A G T C C G T A A C T G A C T G
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTKATTTGMYTYCAGK
NTTTTATTGG--------
 A C G T A C G T C G A T A C G T A C G T C G T A A C G T A C G T A C G T A C T G G T C A A G C T A C G T A G C T A G T C C G T A A C T G A C T G
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T