Information for 2-CTTCCBAGCATDG (Motif 3)

A G T C A C G T A C G T G T A C A G T C A G T C C G T A A C T G A T G C G T C A C G A T C A G T A C T G
Reverse Opposite:
A G T C G C T A C G T A A C G T A T C G A G T C A C G T T A C G A C T G A C T G C G T A C G T A A C T G
p-value:1e-12
log p-value:-2.940e+01
Information Content per bp:1.852
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.3 +/- 24.1bp
Average Position of motif in Background57.7 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT3/MA0144.2/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTTCCBAGCATDG
TTTCCCAGAAN--
 A G T C A C G T A C G T G T A C A G T C A G T C C G T A A C T G A T G C G T C A C G A T C A G T A C T G
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T

PB0115.1_Ehf_2/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CTTCCBAGCATDG
TAGTATTTCCGATCTT--
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T G T A C A G T C A G T C C G T A A C T G A T G C G T C A C G A T C A G T A C T G
C G A T C G T A T C A G C A G T C T G A A C G T C G A T C G A T G A T C G A T C A C T G G C T A G C A T T A G C C G A T G C A T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTTCCBAGCATDG
ATTTCCAAGAA---
 A C G T A G T C A C G T A C G T G T A C A G T C A G T C C G T A A C T G A T G C G T C A C G A T C A G T A C T G
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTTCCBAGCATDG
GCTTCC--------
 A C G T A G T C A C G T A C G T G T A C A G T C A G T C C G T A A C T G A T G C G T C A C G A T C A G T A C T G
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTTCCBAGCATDG
-TGCCCAGNHW--
 A G T C A C G T A C G T G T A C A G T C A G T C C G T A A C T G A T G C G T C A C G A T C A G T A C T G
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTTCCBAGCATDG
HTTTCCCASG----
 A C G T A G T C A C G T A C G T G T A C A G T C A G T C C G T A A C T G A T G C G T C A C G A T C A G T A C T G
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTTCCBAGCATDG
CTTCCNGGAA---
 A G T C A C G T A C G T G T A C A G T C A G T C C G T A A C T G A T G C G T C A C G A T C A G T A C T G
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTTCCBAGCATDG
NNNTTTCCTGGAAA--
 A C G T A C G T A C G T A G T C A C G T A C G T G T A C A G T C A G T C C G T A A C T G A T G C G T C A C G A T C A G T A C T G
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A A C G T A C G T

ETV6/MA0645.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTTCCBAGCATDG
CACTTCCGCT-----
 A C G T A C G T A G T C A C G T A C G T G T A C A G T C A G T C C G T A A C T G A T G C G T C A C G A T C A G T A C T G
G A T C T C G A A G T C G C A T A G C T G T A C G T A C A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTTCCBAGCATDG
TTTCCTGGAAA--
 A G T C A C G T A C G T G T A C A G T C A G T C C G T A A C T G A T G C G T C A C G A T C A G T A C T G
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T A C G T