Information for 6-GTAACAACTA (Motif 29)

A C T G A C G T C G T A C G T A A G T C C G T A C G T A A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C G T A C G T A C T G A C G T A C G T C G T A A G T C
p-value:1e-6
log p-value:-1.488e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.7 +/- 28.1bp
Average Position of motif in Background25.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0172.1_Sox1_2/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GTAACAACTA---
NNNTAACAATTATAN
 A C G T A C G T A C T G A C G T C G T A C G T A A G T C C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GTAACAACTA---
ATGTCACAACAACAC
 A C G T A C G T A C T G A C G T C G T A C G T A A G T C C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

DMRT3/MA0610.1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GTAACAACTA
AATGTATCAAT--
 A C G T A C G T A C G T A C T G A C G T C G T A C G T A A G T C C G T A C G T A A G T C A C G T C G T A
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GTAACAACTA
-TCACACCT-
 A C T G A C G T C G T A C G T A A G T C C G T A C G T A A G T C A C G T C G T A
A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTAACAACTA
-TGACACCT-
 A C T G A C G T C G T A C G T A A G T C C G T A C G T A A G T C A C G T C G T A
A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GTAACAACTA-
NNCNNAACAATTNT
 A C G T A C G T A C G T A C T G A C G T C G T A C G T A A G T C C G T A C G T A A G T C A C G T C G T A A C G T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

PB0175.1_Sox4_2/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTAACAACTA----
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C T G A C G T C G T A C G T A A G T C C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

TBX5/MA0807.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTAACAACTA
-TCACACCT-
 A C T G A C G T C G T A C G T A A G T C C G T A C G T A A G T C A C G T C G T A
A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GTAACAACTA
NTTNAGAACAATTA
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G T A A G T C C G T A C G T A A G T C A C G T C G T A
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTAACAACTA
KTTCACACCT-
 A C G T A C T G A C G T C G T A C G T A A G T C C G T A C G T A A G T C A C G T C G T A
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T