Information for 10-GGADAGATCTCTA (Motif 25)

C A T G A T C G C G T A C G A T C G T A A T C G C G T A C G A T A G T C C G A T A G T C C G A T C G T A
Reverse Opposite:
A C G T C G T A C T A G C G T A A C T G C G T A C G A T T A G C A C G T G C A T A C G T A T G C G T A C
p-value:1e-7
log p-value:-1.770e+01
Information Content per bp:1.787
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.7 +/- 31.9bp
Average Position of motif in Background66.7 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGADAGATCTCTA---
----AGGTCTCTAACC
 C A T G A T C G C G T A C G A T C G T A A T C G C G T A C G A T A G T C C G A T A G T C C G A T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGADAGATCTCTA---
GACAGAGATATCAGTGT
 A C G T C A T G A T C G C G T A C G A T C G T A A T C G C G T A C G A T A G T C C G A T A G T C C G A T C G T A A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGADAGATCTCTA-
TCTCAAAGGTCACCTG
 A C G T A C G T C A T G A T C G C G T A C G A T C G T A A T C G C G T A C G A T A G T C C G A T A G T C C G A T C G T A A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGADAGATCTCTA
ANGNAAAGGTCA---
 A C G T A C G T C A T G A T C G C G T A C G A T C G T A A T C G C G T A C G A T A G T C C G A T A G T C C G A T C G T A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGADAGATCTCTA
---AAGGTCAC--
 C A T G A T C G C G T A C G A T C G T A A T C G C G T A C G A T A G T C C G A T A G T C C G A T C G T A
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGADAGATCTCTA-
TCTCAAAGGTCACGAG
 A C G T A C G T C A T G A T C G C G T A C G A T C G T A A T C G C G T A C G A T A G T C C G A T A G T C C G A T C G T A A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

HNF4G/MA0484.1/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GGADAGATCTCTA
AGAGTCCAAAGTCCA---
 A C G T A C G T A C G T A C G T A C G T C A T G A T C G C G T A C G A T C G T A A T C G C G T A C G A T A G T C C G A T A G T C C G A T C G T A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGADAGATCTCTA
-CAAAGGTCAG--
 C A T G A T C G C G T A C G A T C G T A A T C G C G T A C G A T A G T C C G A T A G T C C G A T C G T A
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GGADAGATCTCTA
TAGGGCAAAGGTCA---
 A C G T A C G T A C G T A C G T C A T G A T C G C G T A C G A T C G T A A T C G C G T A C G A T A G T C C G A T A G T C C G A T C G T A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GGADAGATCTCTA----
--NNAGATNVNWATCTN
 C A T G A T C G C G T A C G A T C G T A A T C G C G T A C G A T A G T C C G A T A G T C C G A T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T G A C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T T A C G