Information for 12-GTGTGCTTCTCMTGCT (Motif 20)

A T C G C G A T T A C G C G A T C T A G A G T C C G A T A C G T G A T C C G A T A G T C G T A C C A G T C T A G G A T C A C G T
Reverse Opposite:
G T C A C A T G A G T C G T C A A C T G T A C G C G T A C A T G C G T A C G T A T A C G A G T C C G T A A T G C C G T A A T G C
p-value:1e-8
log p-value:-2.020e+01
Information Content per bp:1.712
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif50.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets42.0 +/- 23.7bp
Average Position of motif in Background49.5 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GTGTGCTTCTCMTGCT
NNNNTTGTGTGCTTNN------
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G A T T A C G C G A T C T A G A G T C C G A T A C G T G A T C C G A T A G T C G T A C C A G T C T A G G A T C A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTGTGCTTCTCMTGCT
GCTGTGGTTT-------
 A C G T A T C G C G A T T A C G C G A T C T A G A G T C C G A T A C G T G A T C C G A T A G T C G T A C C A G T C T A G G A T C A C G T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GTGTGCTTCTCMTGCT
NNGCGTGTGTGCNGCN------
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G A T T A C G C G A T C T A G A G T C C G A T A C G T G A T C C G A T A G T C G T A C C A G T C T A G G A T C A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GTGTGCTTCTCMTGCT
NNTGTGGTTT-------
 A C G T A T C G C G A T T A C G C G A T C T A G A G T C C G A T A C G T G A T C C G A T A G T C G T A C C A G T C T A G G A T C A C G T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GTGTGCTTCTCMTGCT
----GCTTCC------
 A T C G C G A T T A C G C G A T C T A G A G T C C G A T A C G T G A T C C G A T A G T C G T A C C A G T C T A G G A T C A C G T
A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GTGTGCTTCTCMTGCT
GTCTGTGGTTT-------
 A C G T A C G T A T C G C G A T T A C G C G A T C T A G A G T C C G A T A C G T G A T C C G A T A G T C G T A C C A G T C T A G G A T C A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTGTGCTTCTCMTGCT
CTGTGGTTTN------
 A T C G C G A T T A C G C G A T C T A G A G T C C G A T A C G T G A T C C G A T A G T C G T A C C A G T C T A G G A T C A C G T
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGCTTCTCMTGCT
NNHTGTGGTTWN------
 A C G T A C G T A T C G C G A T T A C G C G A T C T A G A G T C C G A T A C G T G A T C C G A T A G T C G T A C C A G T C T A G G A T C A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GTGTGCTTCTCMTGCT-
NTNTTCTTATCAGTNTN
 A T C G C G A T T A C G C G A T C T A G A G T C C G A T A C G T G A T C C G A T A G T C G T A C C A G T C T A G G A T C A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGCTTCTCMTGCT
TGCTGTGATTT-------
 A C G T A C G T A T C G C G A T T A C G C G A T C T A G A G T C C G A T A C G T G A T C C G A T A G T C G T A C C A G T C T A G G A T C A C G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T