Information for 11-MRGCTGCCTCCTGKTG (Motif 19)

T G C A C T A G A C T G G T A C C A G T A C T G A G T C A G T C G A C T A G T C G A T C G C A T A C T G A C G T C G A T A C T G
Reverse Opposite:
G T A C C G T A T G C A A G T C C G T A C A T G C T A G C G T A A C T G C T A G T G A C G T C A A C T G G T A C G A T C A C G T
p-value:1e-8
log p-value:-2.063e+01
Information Content per bp:1.721
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.8 +/- 22.8bp
Average Position of motif in Background15.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--MRGCTGCCTCCTGKTG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T T G C A C T A G A C T G G T A C C A G T A C T G A G T C A G T C G A C T A G T C G A T C G C A T A C T G A C G T C G A T A C T G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:MRGCTGCCTCCTGKTG----
ANAGTGCCACCTGGTGGCCA
 T G C A C T A G A C T G G T A C C A G T A C T G A G T C A G T C G A C T A G T C G A T C G C A T A C T G A C G T C G A T A C T G A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:MRGCTGCCTCCTGKTG----
-TAGCGCCCCCTGGTGGCCA
 T G C A C T A G A C T G G T A C C A G T A C T G A G T C A G T C G A C T A G T C G A T C G C A T A C T G A C G T C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:MRGCTGCCTCCTGKTG--
------CCCCCTGCTGTG
 T G C A C T A G A C T G G T A C C A G T A C T G A G T C A G T C G A C T A G T C G A T C G C A T A C T G A C G T C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

SCRT2/MA0744.1/Jaspar

Match Rank:5
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:MRGCTGCCTCCTGKTG---
------CCACCTGTTGCAT
 T G C A C T A G A C T G G T A C C A G T A C T G A G T C A G T C G A C T A G T C G A T C G C A T A C T G A C G T C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

SCRT1/MA0743.1/Jaspar

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:MRGCTGCCTCCTGKTG---
----ANCCACCTGTTGCNC
 T G C A C T A G A C T G G T A C C A G T A C T G A G T C A G T C G A C T A G T C G A T C G C A T A C T G A C G T C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.62
Offset:4
Orientation:forward strand
Alignment:MRGCTGCCTCCTGKTG---
----GGCCYCCTGCTGDGH
 T G C A C T A G A C T G G T A C C A G T A C T G A G T C A G T C G A C T A G T C G A T C G C A T A C T G A C G T C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:MRGCTGCCTCCTGKTG
CAGCTGTTTCCT----
 T G C A C T A G A C T G G T A C C A G T A C T G A G T C A G T C G A C T A G T C G A T C G C A T A C T G A C G T C G A T A C T G
G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:MRGCTGCCTCCTGKTG-----
------TCNCCTGCTGNGNNN
 T G C A C T A G A C T G G T A C C A G T A C T G A G T C A G T C G A C T A G T C G A T C G C A T A C T G A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:MRGCTGCCTCCTGKTG-----
------TNTCCTGCTGTGNNG
 T G C A C T A G A C T G G T A C C A G T A C T G A G T C A G T C G A C T A G T C G A T C G C A T A C T G A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G