Information for 9-GTTTCCTAGGGTTTNT (Motif 17)

A C T G C G A T C G A T A G C T G A T C G T A C C G A T C G T A A C T G C T A G A C T G G A C T A C G T A C G T C G T A C A G T
Reverse Opposite:
G C T A A C G T T G C A C G T A C G T A A G T C G A T C A G T C G C A T C G T A A C T G C A T G C T G A C G T A C G T A G T A C
p-value:1e-9
log p-value:-2.125e+01
Information Content per bp:1.724
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif13.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets58.4 +/- 22.1bp
Average Position of motif in Background35.4 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1/MA0154.3/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTTTCCTAGGGTTTNT
ANTCCCTNGGGAAT--
 A C T G C G A T C G A T A G C T G A T C G T A C C G A T C G T A A C T G C T A G A C T G G A C T A C G T A C G T C G T A C A G T
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T A C G T A C G T

BCL6B/MA0731.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTTTCCTAGGGTTTNT
TGCTTTCTAGGAATTCA
 A C G T A C T G C G A T C G A T A G C T G A T C G T A C C G A T C G T A A C T G C T A G A C T G G A C T A C G T A C G T C G T A C A G T
A G C T C T A G A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G C T G A C G T A A G C T A G C T T G A C T G C A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:GTTTCCTAGGGTTTNT
-------NGGGATTA-
 A C T G C G A T C G A T A G C T G A T C G T A C C G A T C G T A A C T G C T A G A C T G G A C T A C G T A C G T C G T A C A G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTTTCCTAGGGTTTNT
NGTCCCNNGGGA----
 A C T G C G A T C G A T A G C T G A T C G T A C C G A T C G T A A C T G C T A G A C T G G A C T A C G T A C G T C G T A C A G T
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GTTTCCTAGGGTTTNT
NNAATTTTATTGGNTN---
 A C G T A C G T A C G T A C T G C G A T C G A T A G C T G A T C G T A C C G A T C G T A A C T G C T A G A C T G G A C T A C G T A C G T C G T A C A G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:6
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:GTTTCCTAGGGTTTNT-
--------GGGATTANN
 A C T G C G A T C G A T A G C T G A T C G T A C C G A T C G T A A C T G C T A G A C T G G A C T A C G T A C G T C G T A C A G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

HOXB13/MA0901.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTTTCCTAGGGTTTNT
NTTTTATTGG------
 A C T G C G A T C G A T A G C T G A T C G T A C C G A T C G T A A C T G C T A G A C T G G A C T A C G T A C G T C G T A C A G T
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTTTCCTAGGGTTTNT
-TTTTATKRGG-----
 A C T G C G A T C G A T A G C T G A T C G T A C C G A T C G T A A C T G C T A G A C T G G A C T A C G T A C G T C G T A C A G T
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T A C G T A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GTTTCCTAGGGTTTNT----
---TTAGAGGGATTAACAAT
 A C T G C G A T C G A T A G C T G A T C G T A C C G A T C G T A A C T G C T A G A C T G G A C T A C G T A C G T C G T A C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PH0130.1_Otx2/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GTTTCCTAGGGTTTNT-----
----TGTAGGGATTAATTGTC
 A C T G C G A T C G A T A G C T G A T C G T A C C G A T C G T A A C T G C T A G A C T G G A C T A C G T A C G T C G T A C A G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C