Information for 2-RCTTKGYKYCCTGYCT (Motif 9)

C T A G A G T C A G C T G A C T A C G T A C T G A G T C A C G T A G C T A G T C A G T C A C G T A C T G A G C T A G T C A C G T
Reverse Opposite:
C G T A A C T G T C G A A G T C C G T A A C T G C T A G C T G A G T C A C T A G A G T C G T C A C G T A C T G A A C T G A G T C
p-value:1e-10
log p-value:-2.464e+01
Information Content per bp:1.841
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.6 +/- 27.8bp
Average Position of motif in Background38.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:RCTTKGYKYCCTGYCT
--TTGGCATGGTGCCA
 C T A G A G T C A G C T G A C T A C G T A C T G A G T C A C G T A G C T A G T C A G T C A C G T A C T G A G C T A G T C A C G T
A C G T A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:RCTTKGYKYCCTGYCT
-----ATTTCCTGTN-
 C T A G A G T C A G C T G A C T A C G T A C T G A G T C A C G T A G C T A G T C A G T C A C G T A C T G A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:RCTTKGYKYCCTGYCT
----CACTTCCTGT--
 C T A G A G T C A G C T G A C T A C G T A C T G A G T C A C G T A G C T A G T C A G T C A C G T A C T G A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:RCTTKGYKYCCTGYCT
-----ACTTCCTGTT-
 C T A G A G T C A G C T G A C T A C G T A C T G A G T C A C G T A G C T A G T C A G T C A C G T A C T G A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:RCTTKGYKYCCTGYCT---
-CCTTCCTTCCTTCCTTCC
 C T A G A G T C A G C T G A C T A C G T A C T G A G T C A C G T A G C T A G T C A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T
A C G T A G T C G A T C G A C T C A G T A T G C A G T C A C G T A C G T A T G C G T A C A G C T A G C T G A T C A G T C A G C T A G C T A G T C A G T C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:RCTTKGYKYCCTGYCT
YCTTTGTTCC------
 C T A G A G T C A G C T G A C T A C G T A C T G A G T C A C G T A G C T A G T C A G T C A C G T A C T G A G C T A G T C A C G T
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:RCTTKGYKYCCTGYCT
--CTGGCAGNCTGCCA
 C T A G A G T C A G C T G A C T A C G T A C T G A G T C A C G T A G C T A G T C A G T C A C G T A C T G A G C T A G T C A C G T
A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:RCTTKGYKYCCTGYCT
---NNAYTTCCTGHN-
 C T A G A G T C A G C T G A C T A C G T A C T G A G T C A C G T A G C T A G T C A G T C A C G T A C T G A G C T A G T C A C G T
A C G T A C G T A C G T A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:RCTTKGYKYCCTGYCT
-----ATTTCCTGTN-
 C T A G A G T C A G C T G A C T A C G T A C T G A G T C A C G T A G C T A G T C A G T C A C G T A C T G A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:RCTTKGYKYCCTGYCT-
-CTTGGCANNNTGCCAA
 C T A G A G T C A G C T G A C T A C G T A C T G A G T C A C G T A G C T A G T C A G T C A C G T A C T G A G C T A G T C A C G T A C G T
A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A