Information for 5-GTCCCTGACCCAG (Motif 6)

A T C G A C G T A G T C G T A C A G T C A C G T A T C G C G T A A T G C A G T C A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C T A G A T C G A C G T A T G C C G T A A C T G A C T G A C T G C G T A A T G C
p-value:1e-12
log p-value:-2.867e+01
Information Content per bp:1.905
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.6 +/- 14.3bp
Average Position of motif in Background52.5 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTCCCTGACCCAG----
-NNNNTGACCCGGCGCG
 A T C G A C G T A G T C G T A C A G T C A C G T A T C G C G T A A T G C A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

PB0157.1_Rara_2/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTCCCTGACCCAG----
-NNCNTGACCCCGCTCT
 A T C G A C G T A G T C G T A C A G T C A C G T A T C G C G T A A T G C A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTCCCTGACCCAG
TGACCTTGACCT--
 A C G T A T C G A C G T A G T C G T A C A G T C A C G T A T C G C G T A A T G C A G T C A G T C C G T A A C T G
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:4
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GTCCCTGACCCAG--
-----TGACTCAGCA
 A T C G A C G T A G T C G T A C A G T C A C G T A T C G C G T A A T G C A G T C A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C T G C G T A A T G C C G A T G T A C C T G A A C T G A T G C G C T A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTCCCTGACCCAG
TGACCTTGACCT--
 A C G T A T C G A C G T A G T C G T A C A G T C A C G T A T C G C G T A A T G C A G T C A G T C C G T A A C T G
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GTCCCTGACCCAG--
---GCTGASTCAGCA
 A T C G A C G T A G T C G T A C A G T C A C G T A T C G C G T A A T G C A G T C A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A

FOS::JUN/MA0099.2/Jaspar

Match Rank:7
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GTCCCTGACCCAG
-----TGACTCA-
 A T C G A C G T A G T C G T A C A G T C A C G T A T C G C G T A A T G C A G T C A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTCCCTGACCCAG
NAGGTCANTGACCT--
 A C G T A C G T A C G T A T C G A C G T A G T C G T A C A G T C A C G T A T C G C G T A A T G C A G T C A G T C C G T A A C T G
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T A C G T

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GTCCCTGACCCAG-
----ATGACTCATC
 A T C G A C G T A G T C G T A C A G T C A C G T A T C G C G T A A T G C A G T C A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:10
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GTCCCTGACCCAG--
-----TGACCTARTT
 A T C G A C G T A G T C G T A C A G T C A C G T A T C G C G T A A T G C A G T C A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T