Information for 4-CAGGTGCAGT (Motif 14)

A G T C C G T A C T A G A T C G C A G T C T A G T G A C G T C A A C T G A C G T
Reverse Opposite:
C G T A G T A C C A G T A C T G A G T C G T C A A T G C A G T C C G A T A C T G
p-value:1e-9
log p-value:-2.194e+01
Information Content per bp:1.842
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.20%
Number of Background Sequences with motif172.4
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets38.0 +/- 18.7bp
Average Position of motif in Background48.3 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ID4/MA0824.1/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGCAGT
GACAGGTGTN--
 A C G T A C G T A G T C C G T A C T A G A T C G C A G T C T A G T G A C G T C A A C T G A C G T
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGCAGT
NNCAGGTGCG--
 A C G T A C G T A G T C C G T A C T A G A T C G C A G T C T A G T G A C G T C A A C T G A C G T
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:3
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----CAGGTGCAGT--
ATCCACAGGTGCGAAAA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G A T C G C A G T C T A G T G A C G T C A A C T G A C G T A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

TCF3/MA0522.2/Jaspar

Match Rank:4
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGCAGT
NNCAGGTGTN--
 A C G T A C G T A G T C C G T A C T A G A T C G C A G T C T A G T G A C G T C A A C T G A C G T
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGCAGT
NNCAGGTGNN--
 A C G T A C G T A G T C C G T A C T A G A T C G C A G T C T A G T G A C G T C A A C T G A C G T
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---CAGGTGCAGT
SDGCAGGTGCNS-
 A C G T A C G T A C G T A G T C C G T A C T A G A T C G C A G T C T A G T G A C G T C A A C T G A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:7
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CAGGTGCAGT
AACAGGTGT---
 A C G T A C G T A G T C C G T A C T A G A T C G C A G T C T A G T G A C G T C A A C T G A C G T
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CAGGTGCAGT
VCAGGTRDRY-
 A C G T A G T C C G T A C T A G A T C G C A G T C T A G T G A C G T C A A C T G A C G T
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CAGGTGCAGT
GACAGCTGCAG-
 A C G T A C G T A G T C C G T A C T A G A T C G C A G T C T A G T G A C G T C A A C T G A C G T
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CAGGTGCAGT
AACAGCTGCAG-
 A C G T A C G T A G T C C G T A C T A G A T C G C A G T C T A G T G A C G T C A A C T G A C G T
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T