Information for 10-GCATTKGYCYGGR (Motif 13)

A C T G A G T C C G T A A C G T A C G T A C G T A C T G A G C T A G T C A G T C A T C G A C T G C T A G
Reverse Opposite:
A G T C A G T C A T G C C T A G A C T G C T G A G T A C G T C A C G T A C G T A A C G T A C T G A G T C
p-value:1e-9
log p-value:-2.214e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.2 +/- 29.2bp
Average Position of motif in Background29.4 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCATTKGYCYGGR
CCGATTGGCT----
 A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C T G A G C T A G T C A G T C A T C G A C T G C T A G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:2
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCATTKGYCYGGR-
NNAATTAGTCACGGT
 A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C T G A G C T A G T C A G T C A T C G A C T G C T A G A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

NEUROG2/MA0669.1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCATTKGYCYGGR
AACATATGTC----
 A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C T G A G C T A G T C A G T C A T C G A C T G C T A G
T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C A C G T A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCATTKGYCYGGR
CCATATGT-----
 A C T G A G T C C G T A A C G T A C G T A C G T A C T G A G C T A G T C A G T C A T C G A C T G C T A G
T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCATTKGYCYGGR----
NNTNNTGTCTGGNNTNG
 A C T G A G T C C G T A A C G T A C G T A C G T A C T G A G C T A G T C A G T C A T C G A C T G C T A G A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

E2F7/MA0758.1/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCATTKGYCYGGR---
--TTTTGGCGGGAAAA
 A C T G A G T C C G T A A C G T A C G T A C G T A C T G A G C T A G T C A G T C A T C G A C T G C T A G A C G T A C G T A C G T
A C G T A C G T C G A T C G A T G C A T C G A T T A C G A C T G A G T C A C T G A T C G A T C G C T G A C T G A G C T A G C T A

NFYB/MA0502.1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCATTKGYCYGGR-
CTGATTGGTCNATTT
 A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C T G A G C T A G T C A G T C A T C G A C T G C T A G A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

E2F8/MA0865.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GCATTKGYCYGGR--
---TTTGGCGGGAAA
 A C T G A G T C C G T A A C G T A C G T A C G T A C T G A G C T A G T C A G T C A T C G A C T G C T A G A C G T A C G T
A C G T A C G T A C G T C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GCATTKGYCYGGR
----CTGTCTGG-
 A C T G A G T C C G T A A C G T A C G T A C G T A C T G A G C T A G T C A G T C A T C G A C T G C T A G
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCATTKGYCYGGR
TGATTGGCTANN-
 A C T G A G T C C G T A A C G T A C G T A C G T A C T G A G C T A G T C A G T C A T C G A C T G C T A G
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T