Information for 4-GCDGCCAGGBAGGTGC (Motif 12)

A C T G A T G C C G T A C T A G A G T C A G T C C G T A A C T G A C T G A G T C C T G A A C T G A C T G G A C T C T A G A G T C
Reverse Opposite:
A C T G A G T C C T G A A G T C A G T C A G C T T A C G A G T C A G T C A C G T A C T G A C T G A G T C G A C T A T C G A G T C
p-value:1e-10
log p-value:-2.385e+01
Information Content per bp:1.854
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets72.2 +/- 24.3bp
Average Position of motif in Background43.0 +/- 14.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GCDGCCAGGBAGGTGC--
------SDGCAGGTGCNS
 A C T G A T G C C G T A C T A G A G T C A G T C C G T A A C T G A C T G A G T C C T G A A C T G A C T G G A C T C T A G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

ID4/MA0824.1/Jaspar

Match Rank:2
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:GCDGCCAGGBAGGTGC-
-------GACAGGTGTN
 A C T G A T G C C G T A C T A G A G T C A G T C C G T A A C T G A C T G A G T C C T G A A C T G A C T G G A C T C T A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GCDGCCAGGBAGGTGC
-----AAGGCAAGTGT
 A C T G A T G C C G T A C T A G A G T C A G T C C G T A A C T G A C T G A G T C C T G A A C T G A C T G G A C T C T A G A G T C
A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GCDGCCAGGBAGGTGC
----VCAGGTRDRY--
 A C T G A T G C C G T A C T A G A G T C A G T C C G T A A C T G A C T G A G T C C T G A A C T G A C T G G A C T C T A G A G T C
A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCDGCCAGGBAGGTGC
SCAGYCADGCATGAC-
 A C T G A T G C C G T A C T A G A G T C A G T C C G T A A C T G A C T G A G T C C T G A A C T G A C T G G A C T C T A G A G T C
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C A C G T

TCF4/MA0830.1/Jaspar

Match Rank:6
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GCDGCCAGGBAGGTGC-
-------NNCAGGTGCG
 A C T G A T G C C G T A C T A G A G T C A G T C C G T A A C T G A C T G A G T C C T G A A C T G A C T G G A C T C T A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

SNAI2/MA0745.1/Jaspar

Match Rank:7
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GCDGCCAGGBAGGTGC
-------AACAGGTGT
 A C T G A T G C C G T A C T A G A G T C A G T C C G T A A C T G A C T G A G T C C T G A A C T G A C T G G A C T C T A G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GCDGCCAGGBAGGTGC-
-------NNCAGGTGNN
 A C T G A T G C C G T A C T A G A G T C A G T C C G T A A C T G A C T G A G T C C T G A A C T G A C T G G A C T C T A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GCDGCCAGGBAGGTGC
----CCWGGAATGY--
 A C T G A T G C C G T A C T A G A G T C A G T C C G T A A C T G A C T G A G T C C T G A A C T G A C T G G A C T C T A G A G T C
A C G T A C G T A C G T A C G T A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:10
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:GCDGCCAGGBAGGTGC-
-------NNCAGGTGTN
 A C T G A T G C C G T A C T A G A G T C A G T C C G T A A C T G A C T G A G T C C T G A A C T G A C T G G A C T C T A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T