Information for 16-GAGGCCAGGGTCA (Motif 22)

A C T G C G T A A C T G T A C G G A T C A G T C C G T A C A T G A C T G A C T G A G C T A G T C C G T A
Reverse Opposite:
G C A T T C A G C T G A A G T C G T A C G T A C C G A T A C T G C T A G A T G C A G T C A C G T A G T C
p-value:1e-6
log p-value:-1.416e+01
Information Content per bp:1.781
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif38.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets42.6 +/- 24.9bp
Average Position of motif in Background51.1 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GAGGCCAGGGTCA
-AGGTCAAGGTCA
 A C T G C G T A A C T G T A C G G A T C A G T C C G T A C A T G A C T G A C T G A G C T A G T C C G T A
A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GAGGCCAGGGTCA
-AGGTCAAGGTCA
 A C T G C G T A A C T G T A C G G A T C A G T C C G T A C A T G A C T G A C T G A G C T A G T C C G T A
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

Nr5a2/MA0505.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GAGGCCAGGGTCA--
AAGTTCAAGGTCAGC
 A C T G C G T A A C T G T A C G G A T C A G T C C G T A C A T G A C T G A C T G A G C T A G T C C G T A A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAGGCCAGGGTCA
TRAGGTCA------
 A C G T A C T G C G T A A C T G T A C G G A T C A G T C C G T A C A T G A C T G A C T G A G C T A G T C C G T A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GAGGCCAGGGTCA-
CAGGCCNNGGCCNN
 A C T G C G T A A C T G T A C G G A T C A G T C C G T A C A T G A C T G A C T G A G C T A G T C C G T A A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GAGGCCAGGGTCA
---BTCAAGGTCA
 A C T G C G T A A C T G T A C G G A T C A G T C C G T A C A T G A C T G A C T G A G C T A G T C C G T A
A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAGGCCAGGGTCA
AGRGGTCA------
 A C G T A C T G C G T A A C T G T A C G G A T C A G T C C G T A C A T G A C T G A C T G A G C T A G T C C G T A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GAGGCCAGGGTCA
---NTCAAGGTCA
 A C T G C G T A A C T G T A C G G A T C A G T C C G T A C A T G A C T G A C T G A G C T A G T C C G T A
A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAGGCCAGGGTCA
CAAAGGTCAG-----
 A C G T A C G T A C T G C G T A A C T G T A C G G A T C A G T C C G T A C A T G A C T G A C T G A G C T A G T C C G T A
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAGGCCAGGGTCA----
-AGAGCGGGGTCAAGTA
 A C T G C G T A A C T G T A C G G A T C A G T C C G T A C A T G A C T G A C T G A G C T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A