Information for 7-GTTCGAGGAC (Motif 11)

A C T G A C G T A C G T G T A C T C A G G T C A A C T G A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A G T C A C G T A G T C C A T G T G C A C G T A G T A C
p-value:1e-9
log p-value:-2.176e+01
Information Content per bp:1.860
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif51.8
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets54.8 +/- 32.8bp
Average Position of motif in Background52.1 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GTTCGAGGAC-
AGGTCAAGGTCA
 A C G T A C T G A C G T A C G T G T A C T C A G G T C A A C T G A C T G C G T A A G T C A C G T
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

Nr5a2/MA0505.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GTTCGAGGAC---
AAGTTCAAGGTCAGC
 A C G T A C G T A C T G A C G T A C G T G T A C T C A G G T C A A C T G A C T G C G T A A G T C A C G T A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

PB0006.1_Bcl6b_1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTTCGAGGAC----
TCTTTCGAGGAATTTG
 A C G T A C G T A C T G A C G T A C G T G T A C T C A G G T C A A C T G A C T G C G T A A G T C A C G T A C G T A C G T A C G T
C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G

HINFP/MA0131.2/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GTTCGAGGAC----
--NCGCGGACGTTG
 A C T G A C G T A C G T G T A C T C A G G T C A A C T G A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTTCGAGGAC-
-NTCAAGGTCA
 A C T G A C G T A C G T G T A C T C A G G T C A A C T G A C T G C G T A A G T C A C G T
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GTTCGAGGAC-
BCNGGTTCTAGANCN
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T G T A C T C A G G T C A A C T G A C T G C G T A A G T C A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

STAT1/MA0137.3/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTTCGAGGAC-
TTTCCAGGAAA
 A C T G A C G T A C G T G T A C T C A G G T C A A C T G A C T G C G T A A G T C A C G T
A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTTCGAGGAC-
AGGTCAAGGTCA
 A C G T A C T G A C G T A C G T G T A C T C A G G T C A A C T G A C T G C G T A A G T C A C G T
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

Bcl6/MA0463.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTTCGAGGAC-
NGCTTTCTAGGAAN
 A C G T A C G T A C G T A C T G A C G T A C G T G T A C T C A G G T C A A C T G A C T G C G T A A G T C A C G T
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

Stat4/MA0518.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTTCGAGGAC----
TTTCCAGGAAATGG
 A C T G A C G T A C G T G T A C T C A G G T C A A C T G A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G