Information for 7-AGSTGAGAAGAGKCCA (Motif 8)

C G T A A C T G T A G C C G A T A C T G C T G A C T A G G T C A G C T A T C A G C G T A C T A G A C T G A G T C A T G C C G T A
Reverse Opposite:
G A C T A T C G C T A G T G A C A G T C A C G T A G T C C A G T A C G T A G T C A G C T A G T C G C T A A T C G A G T C C G A T
p-value:1e-10
log p-value:-2.469e+01
Information Content per bp:1.714
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif14.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.2 +/- 17.7bp
Average Position of motif in Background48.8 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGSTGAGAAGAGKCCA
--TAGGGCAAAGGTCA
 C G T A A C T G T A G C C G A T A C T G C T G A C T A G G T C A G C T A T C A G C G T A C T A G A C T G A G T C A T G C C G T A
A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGSTGAGAAGAGKCCA
-AGAGTCCAAAGTCCA
 C G T A A C T G T A G C C G A T A C T G C T G A C T A G G T C A G C T A T C A G C G T A C T A G A C T G A G T C A T G C C G T A
A C G T C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGSTGAGAAGAGKCCA
-GTAGGGCAAAGGTCA
 C G T A A C T G T A G C C G A T A C T G C T G A C T A G G T C A G C T A T C A G C G T A C T A G A C T G A G T C A T G C C G T A
A C G T A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Rarg(var.2)/MA0860.1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGSTGAGAAGAGKCCA
AAGGTCACGAAAGGTCA
 A C G T C G T A A C T G T A G C C G A T A C T G C T G A C T A G G T C A G C T A T C A G C G T A C T A G A C T G A G T C A T G C C G T A
C T G A T C G A A T C G A C T G A C G T G T A C T C G A G T A C A T C G T C G A T C G A T C G A A C T G A C T G G C A T G A T C T C G A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGSTGAGAAGAGKCCA
CANAGNNCAAAGTCCA
 C G T A A C T G T A G C C G A T A C T G C T G A C T A G G T C A G C T A T C A G C G T A C T A G A C T G A G T C A T G C C G T A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGSTGAGAAGAGKCCA----
----GGCAAAAGTCCAATAA
 C G T A A C T G T A G C C G A T A C T G C T G A C T A G G T C A G C T A T C A G C G T A C T A G A C T G A G T C A T G C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGSTGAGAAGAGKCCA
-GGTCANYTGAGGWCA
 C G T A A C T G T A G C C G A T A C T G C T G A C T A G G T C A G C T A T C A G C G T A C T A G A C T G A G T C A T G C C G T A
A C G T C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

TBX20/MA0689.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGSTGAGAAGAGKCCA
TAGGTGTGAAG------
 A C G T C G T A A C T G T A G C C G A T A C T G C T G A C T A G G T C A G C T A T C A G C G T A C T A G A C T G A G T C A T G C C G T A
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGSTGAGAAGAGKCCA
--TGGGGCAAAGGTCA
 C G T A A C T G T A G C C G A T A C T G C T G A C T A G G T C A G C T A T C A G C G T A C T A G A C T G A G T C A T G C C G T A
A C G T A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

EOMES/MA0800.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGSTGAGAAGAGKCCA
AAGGTGTGAAAAT----
 A C G T C G T A A C T G T A G C C G A T A C T G C T G A C T A G G T C A G C T A T C A G C G T A C T A G A C T G A G T C A T G C C G T A
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T A C G T A C G T A C G T