Information for 3-GGCAGCTCCCTTC (Motif 6)

C T A G A C T G A G T C C G T A A T C G A G T C A C G T A G T C A G T C A G T C A C G T A C G T A G T C
Reverse Opposite:
C T A G C G T A C G T A A C T G C T A G A C T G C G T A A C T G T A G C A C G T A C T G A G T C A G T C
p-value:1e-12
log p-value:-2.797e+01
Information Content per bp:1.885
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.0 +/- 24.0bp
Average Position of motif in Background48.1 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myod1/MA0499.1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGCAGCTCCCTTC
TGCAGCTGTCCCT
 C T A G A C T G A G T C C G T A A T C G A G T C A C G T A G T C A G T C A G T C A C G T A C G T A G T C
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

Myog/MA0500.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGCAGCTCCCTTC
NNGCAGCTGTC---
 A C G T C T A G A C T G A G T C C G T A A T C G A G T C A C G T A G T C A G T C A G T C A C G T A C G T A G T C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGCAGCTCCCTTC
AGCAGCTGCT---
 C T A G A C T G A G T C C G T A A T C G A G T C A C G T A G T C A G T C A G T C A C G T A C G T A G T C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGCAGCTCCCTTC
NNAGCAGCTGCT---
 A C G T A C G T C T A G A C T G A G T C C G T A A T C G A G T C A C G T A G T C A G T C A G T C A C G T A C G T A G T C
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGCAGCTCCCTTC
NNGCAGCTGTT---
 A C G T C T A G A C T G A G T C C G T A A T C G A G T C A C G T A G T C A G T C A G T C A C G T A C G T A G T C
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGCAGCTCCCTTC
-GCAGCTGTNN--
 C T A G A C T G A G T C C G T A A T C G A G T C A C G T A G T C A G T C A G T C A C G T A C G T A G T C
A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGCAGCTCCCTTC
GGCCACRCCCMK-
 C T A G A C T G A G T C C G T A A T C G A G T C A C G T A G T C A G T C A G T C A C G T A C G T A G T C
C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T

KLF5/MA0599.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGCAGCTCCCTTC
-GCCCCGCCCC--
 C T A G A C T G A G T C C G T A A T C G A G T C A C G T A G T C A G T C A G T C A C G T A C G T A G T C
A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGCAGCTCCCTTC
NVCAGCTGBBNN-
 C T A G A C T G A G T C C G T A A T C G A G T C A C G T A G T C A G T C A G T C A C G T A C G T A G T C
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGCAGCTCCCTTC-
NRGCCCCRCCCHBNN
 A C G T C T A G A C T G A G T C C G T A A T C G A G T C A C G T A G T C A G T C A G T C A C G T A C G T A G T C A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C