Information for 10-TTAAGACTTC (Motif 30)

A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C T G A C G T A G T C A C G T A C G T C G T A C G T A
p-value:1e-5
log p-value:-1.286e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.3 +/- 39.9bp
Average Position of motif in Background59.9 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0047.1_Hoxa11/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TTAAGACTTC-
NNGTTTTACGACTTTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C G T A G T C A C G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

PROX1/MA0794.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TTAAGACTTC---
-TAAGGCGTCTTG
 A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C G T A G T C A C G T A C G T A C G T
A C G T A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

PH0066.1_Hoxc11/Jaspar

Match Rank:3
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TTAAGACTTC-
NNNTTTTACGACNTTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C G T A G T C A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

PH0065.1_Hoxc10/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TTAAGACTTC-
ANNTTTTACGACNTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C G T A G T C A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PB0136.1_IRC900814_2/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTAAGACTTC----
TTTTACGACTTTCCAT
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T
C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTAAGACTTC
ATTAACACCT-
 A C G T A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C G T A G T C
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T

PH0076.1_Hoxd11/Jaspar

Match Rank:7
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------TTAAGACTTC-
ANNATTTTACGACNTNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C G T A G T C A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A

HOXD12/MA0873.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTAAGACTTC
NTTTTACGACT--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C G T A G T C
C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T A C G T A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:9
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------TTAAGACTTC-
NNNATTTTACGACNNTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C G T A G T C A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

HOXC12/MA0906.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TTAAGACTTC
NTTTTACGACC--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C G T A G T C
C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C A C G T A C G T