Information for 7-TGGMAGAGAGCCA (Motif 6)

A C G T A C T G A C T G G T C A T C G A A C T G C T G A A T C G G T C A A C T G A G T C A G T C G C T A
Reverse Opposite:
C G A T A C T G A C T G G T A C A C G T A T G C A G C T G T A C A G C T A C G T A G T C A G T C G T C A
p-value:1e-20
log p-value:-4.657e+01
Information Content per bp:1.793
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.15%
Number of Background Sequences with motif24.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets53.1 +/- 25.2bp
Average Position of motif in Background54.1 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-TGGMAGAGAGCCA--
TTGGCANNNTGCCAAG
 A C G T A C G T A C T G A C T G G T C A T C G A A C T G C T G A A T C G G T C A A C T G A G T C A G T C G C T A A C G T A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-TGGMAGAGAGCCA
CTGGCAGNCTGCCA
 A C G T A C G T A C T G A C T G G T C A T C G A A C T G C T G A A T C G G T C A A C T G A G T C A G T C G C T A
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TGGMAGAGAGCCA-
TGGCACCATGCCAA
 A C G T A C T G A C T G G T C A T C G A A C T G C T G A A T C G G T C A A C T G A G T C A G T C G C T A A C G T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGGMAGAGAGCCA
TGGAACAGMA---
 A C G T A C T G A C T G G T C A T C G A A C T G C T G A A T C G G T C A A C T G A G T C A G T C G C T A
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGGMAGAGAGCCA----
GGGRAARRGRMCAGMTG
 A C G T A C T G A C T G G T C A T C G A A C T G C T G A A T C G G T C A A C T G A G T C A G T C G C T A A C G T A C G T A C G T A C G T
C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TGGMAGAGAGCCA
----AGCGCGCC-
 A C G T A C T G A C T G G T C A T C G A A C T G C T G A A T C G G T C A A C T G A G T C A G T C G C T A
A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TGGMAGAGAGCCA--
------CGTGCCAAG
 A C G T A C T G A C T G G T C A T C G A A C T G C T G A A T C G G T C A A C T G A G T C A G T C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:TGGMAGAGAGCCA-
--------TGCCAA
 A C G T A C T G A C T G G T C A T C G A A C T G C T G A A T C G G T C A A C T G A G T C A G T C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

POL011.1_XCPE1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGGMAGAGAGCCA
-GGGCGGGACC--
 A C G T A C T G A C T G G T C A T C G A A C T G C T G A A T C G G T C A A C T G A G T C A G T C G C T A
A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.53
Offset:7
Orientation:forward strand
Alignment:TGGMAGAGAGCCA
-------CAGCC-
 A C G T A C T G A C T G G T C A T C G A A C T G C T G A A T C G G T C A A C T G A G T C A G T C G C T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T