Information for 5-GATNNHATCW (Motif 4)

A C T G C T G A G A C T T C A G A C T G G A C T C T G A A G C T A G T C G C A T
Reverse Opposite:
C G T A A C T G C T G A A G C T C T G A T G A C A G T C C T G A A G C T A G T C
p-value:1e-28
log p-value:-6.595e+01
Information Content per bp:1.689
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif7.79%
Number of Background Sequences with motif538.6
Percentage of Background Sequences with motif1.15%
Average Position of motif in Targets48.3 +/- 23.0bp
Average Position of motif in Background52.7 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.94
Offset:-7
Orientation:forward strand
Alignment:-------GATNNHATCW---
NNNNNBAGATAWYATCTVHN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A G A C T T C A G A C T G G A C T C T G A A G C T A G T C G C A T A C G T A C G T A C G T
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T

PB0125.1_Gata3_2/Jaspar

Match Rank:2
Score:0.90
Offset:-6
Orientation:reverse strand
Alignment:------GATNNHATCW------
NNNNNCGATANNATCTNNNNAN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A G A C T T C A G A C T G G A C T C T G A A G C T A G T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C G T A C G T A T A C G A G C T G A T C C T A G T C G A A G C T C T G A T G C A C G T A C T G A C A G T G A T C C G A T T C G A A G T C G C T A C G T A T G C A C T G A

PH0014.1_Cphx/Jaspar

Match Rank:3
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--GATNNHATCW--
ATGATCGAATCAAA
 A C G T A C G T A C T G C T G A G A C T T C A G A C T G G A C T C T G A A G C T A G T C G C A T A C G T A C G T
C T G A C G A T T C A G C G T A C A G T A T G C T A C G T G C A G T C A G A C T A G T C C G T A T C G A G C T A

DUXA/MA0884.1/Jaspar

Match Rank:4
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GATNNHATCW-
CTAATTTAATCAA
 A C G T A C G T A C T G C T G A G A C T T C A G A C T G G A C T C T G A A G C T A G T C G C A T A C G T
G A T C G A C T C T G A T C G A G A C T A G C T A G C T T G C A C T G A A C G T A G T C C G T A C T G A

GATA5/MA0766.1/Jaspar

Match Rank:5
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GATNNHATCW
--TCTTATCT
 A C T G C T G A G A C T T C A G A C T G G A C T C T G A A G C T A G T C G C A T
A C G T A C G T A G C T A T G C G A C T C G A T C G T A A G C T A G T C C G A T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GATNNHATCW
--YSTTATCT
 A C T G C T G A G A C T T C A G A C T G G A C T C T G A A G C T A G T C G C A T
A C G T A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GATNNHATCW-
-ATTGCATCAK
 A C T G C T G A G A C T T C A G A C T G G A C T C T G A A G C T A G T C G C A T A C G T
A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GATNNHATCW-
-ATTGCATCAT
 A C T G C T G A G A C T T C A G A C T G G A C T C T G A A G C T A G T C G C A T A C G T
A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T

JUN/MA0488.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GATNNHATCW----
-ATGACATCATCNN
 A C T G C T G A G A C T T C A G A C T G G A C T C T G A A G C T A G T C G C A T A C G T A C G T A C G T A C G T
A C G T T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GATNNHATCW-----
NATGACATCATCNNN
 A C T G C T G A G A C T T C A G A C T G G A C T C T G A A G C T A G T C G C A T A C G T A C G T A C G T A C G T A C G T
A C T G T C G A A C G T A C T G C T G A A G T C T C G A A C G T G T A C C G T A A G C T A G T C G C A T G A C T G C A T