Information for 2-YHVWGATWDWAATCTG (Motif 3)

G A C T G C A T T A G C C G A T A T C G C G T A A C G T C G T A C G A T G C A T G C T A C G T A C A G T A G T C C G A T C A T G
Reverse Opposite:
G T A C C G T A A C T G G T C A A C G T C G A T C G T A G C T A G C A T C G T A A C G T A T G C C G T A A T C G C G T A C T G A
p-value:1e-45
log p-value:-1.039e+02
Information Content per bp:1.620
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif7.38%
Number of Background Sequences with motif223.7
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets47.5 +/- 22.8bp
Average Position of motif in Background50.5 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.97
Offset:2
Orientation:forward strand
Alignment:YHVWGATWDWAATCTG-
--NAGATWNBNATCTNN
 G A C T G C A T T A G C C G A T A T C G C G T A A C G T C G T A C G A T G C A T G C T A C G T A C A G T A G T C C G A T C A T G A C G T
A C G T A C G T A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C

GATA2/MA0036.2/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:YHVWGATWDWAATCTG
-NCAGATAAGAANNN-
 G A C T G C A T T A G C C G A T A T C G C G T A A C G T C G T A C G A T G C A T G C T A C G T A C A G T A G T C C G A T C A T G
A C G T C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T A C G T

GATA5/MA0766.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:YHVWGATWDWAATCTG
---AGATAAGA-----
 G A C T G C A T T A G C C G A T A T C G C G T A A C G T C G T A C G A T G C A T G C T A C G T A C A G T A G T C C G A T C A T G
A C G T A C G T A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:YHVWGATWDWAATCTG-
-TAAGATTATAATACGG
 G A C T G C A T T A G C C G A T A T C G C G T A A C G T C G T A C G A T G C A T G C T A C G T A C A G T A G T C C G A T C A T G A C G T
A C G T G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:YHVWGATWDWAATCTG
---AGATAASR-----
 G A C T G C A T T A G C C G A T A T C G C G T A A C G T C G T A C G A T G C A T G C T A C G T A C A G T A G T C C G A T C A T G
A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T A C G T A C G T A C G T

PB0023.1_Gata6_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--YHVWGATWDWAATCTG
TATAGAGATAAGAATTG-
 A C G T A C G T G A C T G C A T T A G C C G A T A T C G C G T A A C G T C G T A C G A T G C A T G C T A C G T A C A G T A G T C C G A T C A T G
C G A T G T C A C G A T T G C A C A G T G C T A A C T G C G T A A G C T C G T A C G T A A T C G T G C A C T G A C G A T G C A T T C A G A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:YHVWGATWDWAATCTG
CNGTGATTTN------
 G A C T G C A T T A G C C G A T A T C G C G T A A C G T C G T A C G A T G C A T G C T A C G T A C A G T A G T C C G A T C A T G
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:YHVWGATWDWAATCTG
----WATGCAAATGAG
 G A C T G C A T T A G C C G A T A T C G C G T A A C G T C G T A C G A T G C A T G C T A C G T A C A G T A G T C C G A T C A T G
A C G T A C G T A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:YHVWGATWDWAATCTG
----TATGCWAATBAV
 G A C T G C A T T A G C C G A T A T C G C G T A A C G T C G T A C G A T G C A T G C T A C G T A C A G T A G T C C G A T C A T G
A C G T A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

PB0079.1_Sry_1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:YHVWGATWDWAATCTG-
-TATAATTATAATATTC
 G A C T G C A T T A G C C G A T A T C G C G T A A C G T C G T A C G A T G C A T G C T A C G T A C A G T A G T C C G A T C A T G A C G T
A C G T A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C