Information for 15-GTACTTTGGC (Motif 25)

C T A G A C G T C G T A T A G C G A C T A C G T A C G T A C T G C T A G A G T C
Reverse Opposite:
A C T G A G T C A G T C C G T A C G T A C G T A A T C G G C A T G T C A A G T C
p-value:1e-7
log p-value:-1.670e+01
Information Content per bp:1.845
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif93.0
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets47.5 +/- 24.4bp
Average Position of motif in Background54.4 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.74
Offset:5
Orientation:forward strand
Alignment:GTACTTTGGC-
-----TTGGCA
 C T A G A C G T C G T A T A G C G A C T A C G T A C G T A C T G C T A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:GTACTTTGGC---
----NTTGGCANN
 C T A G A C G T C G T A T A G C G A C T A C G T A C G T A C T G C T A G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GTACTTTGGC---
---NNTTGGCANN
 C T A G A C G T C G T A T A G C G A C T A C G T A C G T A C T G C T A G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTACTTTGGC-----
TGGACTTTGNNCTNTG
 A C G T C T A G A C G T C G T A T A G C G A C T A C G T A C G T A C T G C T A G A G T C A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GTACTTTGGC----
TGGACTTTGNNCTCN
 A C G T C T A G A C G T C G T A T A G C G A C T A C G T A C G T A C T G C T A G A G T C A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GTACTTTGGC-
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T A C G T A C G T C T A G A C G T C G T A T A G C G A C T A C G T A C G T A C T G C T A G A G T C A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

Hnf4a/MA0114.3/Jaspar

Match Rank:7
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GTACTTTGGC---
ATTGGACTTTGACCCC
 A C G T A C G T A C G T C T A G A C G T C G T A T A G C G A C T A C G T A C G T A C T G C T A G A G T C A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GTACTTTGGC-
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T A C G T C T A G A C G T C G T A T A G C G A C T A C G T A C G T A C T G C T A G A G T C A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GTACTTTGGC--
----CTTGGCAA
 C T A G A C G T C G T A T A G C G A C T A C G T A C G T A C T G C T A G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:10
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------GTACTTTGGC
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T C G T A T A G C G A C T A C G T A C G T A C T G C T A G A G T C
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A