Information for 13-CTGACCAGGA (Motif 21)

A G T C A C G T T C A G C T G A G T A C G T A C C G T A C A T G A C T G C G T A
Reverse Opposite:
G C A T A G T C G T A C C G A T A C T G A C T G G A C T A G T C C G T A A C T G
p-value:1e-7
log p-value:-1.835e+01
Information Content per bp:1.841
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.28%
Number of Background Sequences with motif181.0
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets48.9 +/- 26.3bp
Average Position of motif in Background48.3 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CTGACCAGGA---
---ANCAGGATGT
 A G T C A C G T T C A G C T G A G T A C G T A C C G T A C A T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

RORA/MA0071.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTGACCAGGA-
-TGACCTTGAT
 A G T C A C G T T C A G C T G A G T A C G T A C C G T A C A T G A C T G C G T A A C G T
A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTGACCAGGA---
NNNNTGACCCGGCGCG
 A C G T A C G T A C G T A G T C A C G T T C A G C T G A G T A C G T A C C G T A C A T G A C T G C G T A A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTGACCAGGA
-TGACCT---
 A G T C A C G T T C A G C T G A G T A C G T A C C G T A C A T G A C T G C G T A
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTGACCAGGA----
GCTGACCTTGAACTN
 A C G T A G T C A C G T T C A G C T G A G T A C G T A C C G T A C A T G A C T G C G T A A C G T A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTGACCAGGA-
-TGACCTTGAV
 A G T C A C G T T C A G C T G A G T A C G T A C C G T A C A T G A C T G C G T A A C G T
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

ESRRB/MA0141.3/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTGACCAGGA
NATGACCTTGA
 A C G T A G T C A C G T T C A G C T G A G T A C G T A C C G T A C A T G A C T G C G T A
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTGACCAGGA
NTGACCTTGA
 A G T C A C G T T C A G C T G A G T A C G T A C C G T A C A T G A C T G C G T A
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

Bcl6/MA0463.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTGACCAGGA--
NGCTTTCTAGGAAN
 A C G T A C G T A G T C A C G T T C A G C T G A G T A C G T A C C G T A C A T G A C T G C G T A A C G T A C G T
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

Esrra/MA0592.2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTGACCAGGA-
ATGACCTTGAA
 A G T C A C G T T C A G C T G A G T A C G T A C C G T A C A T G A C T G C G T A A C G T
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A