Information for 17-GCAAGTATGTCCT (Motif 16)

A C T G A G T C C G T A C G T A A C T G A C G T C G T A C G A T A C T G A G C T A G T C A G T C C G A T
Reverse Opposite:
C G T A A C T G A C T G C T G A A G T C C G T A A C G T G T C A A G T C C G A T A C G T A C T G A G T C
p-value:1e-9
log p-value:-2.206e+01
Information Content per bp:1.906
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.4 +/- 29.2bp
Average Position of motif in Background30.3 +/- 13.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCAAGTATGTCCT
AAGGCAAGTGT-----
 A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G A C G T C G T A C G A T A C T G A G C T A G T C A G T C C G A T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:GCAAGTATGTCCT--
-------TGACCTYA
 A C T G A G T C C G T A C G T A A C T G A C G T C G T A C G A T A C T G A G C T A G T C A G T C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

PB0181.1_Spdef_2/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCAAGTATGTCCT-
CTACTAGGATGTNNTN
 A C G T A C G T A C T G A G T C C G T A C G T A A C T G A C G T C G T A C G A T A C T G A G C T A G T C A G T C C G A T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCAAGTATGTCCT
GCACGTAY-----
 A C T G A G T C C G T A C G T A A C T G A C G T C G T A C G A T A C T G A G C T A G T C A G T C C G A T
C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GCAAGTATGTCCT---
------ATTTCCTGTN
 A C T G A G T C C G T A C G T A A C T G A C G T C G T A C G A T A C T G A G C T A G T C A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCAAGTATGTCCT
--AAGGATATNTN
 A C T G A G T C C G T A C G T A A C T G A C G T C G T A C G A T A C T G A G C T A G T C A G T C C G A T
A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCAAGTATGTCCT
CCWGGAATGY---
 A C T G A G T C C G T A C G T A A C T G A C G T C G T A C G A T A C T G A G C T A G T C A G T C C G A T
A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCAAGTATGTCCT
-CAGCTGTTTCCT
 A C T G A G T C C G T A C G T A A C T G A C G T C G T A C G A T A C T G A G C T A G T C A G T C C G A T
A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T

PB0170.1_Sox17_2/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GCAAGTATGTCCT-
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G A C G T C G T A C G A T A C T G A G C T A G T C A G T C C G A T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:GCAAGTATGTCCT
-------TGACCT
 A C T G A G T C C G T A C G T A A C T G A C G T C G T A C G A T A C T G A G C T A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T