Information for 14-TTTGTATATTTAC (Motif 13)

G C A T A C G T A C G T A C T G C G A T C T G A C G A T C G T A A C G T A C G T A G C T G T C A G A T C
Reverse Opposite:
C T A G A C G T T C G A G T C A C G T A C G A T C G T A A G C T C G T A G T A C C G T A C G T A C G T A
p-value:1e-10
log p-value:-2.405e+01
Information Content per bp:1.779
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif12.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets60.0 +/- 30.9bp
Average Position of motif in Background43.5 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxq1/MA0040.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TTTGTATATTTAC
TATTGTTTATT---
 A C G T G C A T A C G T A C G T A C T G C G A T C T G A C G A T C G T A A C G T A C G T A G C T G T C A G A T C
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T A C G T

PB0198.1_Zfp128_2/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TTTGTATATTTAC---
--TGTATATATATACC
 G C A T A C G T A C G T A C T G C G A T C T G A C G A T C G T A A C G T A C G T A G C T G T C A G A T C A C G T A C G T A C G T
A C G T A C G T C A G T C A T G G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G A C T C G T A T G A C A T G C

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTTGTATATTTAC
ATTTGCATAT----
 A C G T G C A T A C G T A C G T A C T G C G A T C T G A C G A T C G T A A C G T A C G T A G C T G T C A G A T C
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTTGTATATTTAC
CTCATGAATATTCAT
 A C G T A C G T G C A T A C G T A C G T A C T G C G A T C T G A C G A T C G T A A C G T A C G T A G C T G T C A G A T C
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

Foxj3/MA0851.1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTATATTTAC-
NNNTTTGTTTACNTTNN
 A C G T A C G T A C G T G C A T A C G T A C G T A C T G C G A T C T G A C G A T C G T A A C G T A C G T A G C T G T C A G A T C A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTATATTTAC-
NNNTTTGTTTACNTTNN
 A C G T A C G T A C G T G C A T A C G T A C G T A C T G C G A T C T G A C G A T C G T A A C G T A C G T A G C T G T C A G A T C A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTTGTATATTTAC
NNNNTTTGTTTACNNT-
 A C G T A C G T A C G T A C G T G C A T A C G T A C G T A C T G C G A T C T G A C G A T C G T A A C G T A C G T A G C T G T C A G A T C
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T A C G T

SRY/MA0084.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTTGTATATTTAC
ATTGTTTAN----
 G C A T A C G T A C G T A C T G C G A T C T G A C G A T C G T A A C G T A C G T A G C T G T C A G A T C
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTTGTATATTTAC
GAATGTTTGTTT--
 A C G T G C A T A C G T A C G T A C T G C G A T C T G A C G A T C G T A A C G T A C G T A G C T G T C A G A T C
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TTTGTATATTTAC
-ATGAATATTC--
 G C A T A C G T A C G T A C T G C G A T C T G A C G A T C G T A A C G T A C G T A G C T G T C A G A T C
A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T