Information for 4-CCTGTGACTAACA (Motif 8)

T A G C A G T C A G C T A T C G A C G T A C T G T C G A A G T C C G A T C T G A C T G A T A G C G C T A
Reverse Opposite:
C G A T A T C G A G C T A G C T C G T A C T A G A C G T G T A C C G T A A T G C C T G A A C T G A C T G
p-value:1e-12
log p-value:-2.981e+01
Information Content per bp:1.783
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif20.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets37.1 +/- 16.8bp
Average Position of motif in Background46.6 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCTGTGACTAACA
RTCATGTGAC-----
 A C G T A C G T T A G C A G T C A G C T A T C G A C G T A C T G T C G A A G T C C G A T C T G A C T G A T A G C G C T A
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCTGTGACTAACA
GCTGTG-------
 T A G C A G T C A G C T A T C G A C G T A C T G T C G A A G T C C G A T C T G A C T G A T A G C G C T A
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CCTGTGACTAACA--
---BTGABTGACAGS
 T A G C A G T C A G C T A T C G A C G T A C T G T C G A A G T C C G A T C T G A C T G A T A G C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCTGTGACTAACA
GSCTGTCACTCA--
 A C G T T A G C A G T C A G C T A T C G A C G T A C T G T C G A A G T C C G A T C T G A C T G A T A G C G C T A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCTGTGACTAACA
GTCATGTGACC----
 A C G T A C G T T A G C A G T C A G C T A T C G A C G T A C T G T C G A A G T C C G A T C T G A C T G A T A G C G C T A
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T A C G T A C G T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCTGTGACTAACA--
ACCGTGACTAATTNN
 T A G C A G T C A G C T A T C G A C G T A C T G T C G A A G T C C G A T C T G A C T G A T A G C G C T A A C G T A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CCTGTGACTAACA--
---NTGATTGACAGN
 T A G C A G T C A G C T A T C G A C G T A C T G T C G A A G T C C G A T C T G A C T G A T A G C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCTGTGACTAACA
-NCGTGACN----
 T A G C A G T C A G C T A T C G A C G T A C T G T C G A A G T C C G A T C T G A C T G A T A G C G C T A
A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCTGTGACTAACA
GTCTGTGGTTT---
 A C G T T A G C A G T C A G C T A T C G A C G T A C T G T C G A A G T C C G A T C T G A C T G A T A G C G C T A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CCTGTGACTAACA
AAGCACCTGTCAATAT--
 A C G T A C G T A C G T A C G T A C G T T A G C A G T C A G C T A T C G A C G T A C T G T C G A A G T C C G A T C T G A C T G A T A G C G C T A
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T A C G T A C G T