Information for 10-TRTRTATAYATAS (Motif 18)

A C G T C T G A A C G T C T G A A C G T C T G A A C G T C G T A A G C T C G T A A G C T C G T A A T G C
Reverse Opposite:
T A C G A C G T C T G A A C G T C T G A A C G T C G T A A G C T C G T A A G C T C G T A G A C T C G T A
p-value:1e-2
log p-value:-6.692e+00
Information Content per bp:1.864
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.0 +/- 6.0bp
Average Position of motif in Background45.5 +/- 10.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0198.1_Zfp128_2/Jaspar

Match Rank:1
Score:0.81
Offset:0
Orientation:forward strand
Alignment:TRTRTATAYATAS-
TGTATATATATACC
 A C G T C T G A A C G T C T G A A C G T C T G A A C G T C G T A A G C T C G T A A G C T C G T A A T G C A C G T
C A G T C A T G G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G A C T C G T A T G A C A T G C

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:2
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---TRTRTATAYATAS
AYATGYATATGCATR-
 A C G T A C G T A C G T A C G T C T G A A C G T C T G A A C G T C T G A A C G T C G T A A G C T C G T A A G C T C G T A A T G C
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TRTRTATAYATAS---
ANNNGGATATATCCNNN
 A C G T A C G T C T G A A C G T C T G A A C G T C T G A A C G T C G T A A G C T C G T A A G C T C G T A A T G C A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

PB0080.1_Tbp_1/Jaspar

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TRTRTATAYATAS---
NANTTATATATAANGN
 A C G T C T G A A C G T C T G A A C G T C T G A A C G T C G T A A G C T C G T A A G C T C G T A A T G C A C G T A C G T A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

FOXB1/MA0845.1/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TRTRTATAYATAS
TATGTAAATAT--
 A C G T C T G A A C G T C T G A A C G T C T G A A C G T C G T A A G C T C G T A A G C T C G T A A T G C
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TRTRTATAYATAS
-ATATTTACATA-
 A C G T C T G A A C G T C T G A A C G T C T G A A C G T C G T A A G C T C G T A A G C T C G T A A T G C
A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TRTRTATAYATAS-----
---GTATAAAAGGCGGGG
 A C G T C T G A A C G T C T G A A C G T C T G A A C G T C G T A A G C T C G T A A G C T C G T A A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:8
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TRTRTATAYATAS-----
---GTATAAAAGGCGGGG
 A C G T C T G A A C G T C T G A A C G T C T G A A C G T C G T A A G C T C G T A A G C T C G T A A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

FOXC2/MA0846.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TRTRTATAYATAS
TTTGTTTACTTA-
 A C G T C T G A A C G T C T G A A C G T C T G A A C G T C G T A A G C T C G T A A G C T C G T A A T G C
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TRTRTATAYATAS
-GHATATKCAT--
 A C G T C T G A A C G T C T G A A C G T C T G A A C G T C G T A A G C T C G T A A G C T C G T A A T G C
A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T