Information for 14-GGCCCTGTCA (Motif 15)

A T C G A C T G A G T C G T A C A G T C A C G T A C T G G C A T T G A C G C T A
Reverse Opposite:
C G A T A C T G C G T A G T A C C G T A C T A G C A T G T C A G G T A C T A G C
p-value:1e-7
log p-value:-1.660e+01
Information Content per bp:1.822
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.74%
Number of Background Sequences with motif321.6
Percentage of Background Sequences with motif0.68%
Average Position of motif in Targets50.6 +/- 25.2bp
Average Position of motif in Background49.2 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.78
Offset:3
Orientation:reverse strand
Alignment:GGCCCTGTCA-
---GCTGTCAA
 A T C G A C T G A G T C G T A C A G T C A C G T A C T G G C A T T G A C G C T A A C G T
A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:GGCCCTGTCA-
---CCTGTCAA
 A T C G A C T G A G T C G T A C A G T C A C G T A C T G G C A T T G A C G C T A A C G T
A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

PH0141.1_Pknox2/Jaspar

Match Rank:3
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GGCCCTGTCA----
AAGCACCTGTCAATAT
 A C G T A C G T A T C G A C T G A G T C G T A C A G T C A C G T A C T G G C A T T G A C G C T A A C G T A C G T A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:GGCCCTGTCA-
----NTGTCAN
 A T C G A C T G A G T C G T A C A G T C A C G T A C T G G C A T T G A C G C T A A C G T
A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

PH0140.1_Pknox1/Jaspar

Match Rank:5
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GGCCCTGTCA----
AAAGACCTGTCAATCC
 A C G T A C G T A T C G A C T G A G T C G T A C A G T C A C G T A C T G G C A T T G A C G C T A A C G T A C G T A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GGCCCTGTCA--
--VGCTGWCAVB
 A T C G A C T G A G T C G T A C A G T C A C G T A C T G G C A T T G A C G C T A A C G T A C G T
A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

PH0105.1_Meis3/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GGCCCTGTCA----
AATTACCTGTCAATAC
 A C G T A C G T A T C G A C T G A G T C G T A C A G T C A C G T A C T G G C A T T G A C G C T A A C G T A C G T A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PH0104.1_Meis2/Jaspar

Match Rank:8
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GGCCCTGTCA----
AAAGACCTGTCAATAC
 A C G T A C G T A T C G A C T G A G T C G T A C A G T C A C G T A C T G G C A T T G A C G C T A A C G T A C G T A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.69
Offset:4
Orientation:forward strand
Alignment:GGCCCTGTCA--
----YTGWCADY
 A T C G A C T G A G T C G T A C A G T C A C G T A C T G G C A T T G A C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

PH0102.1_Meis1/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GGCCCTGTCA----
AACGAGCTGTCAATAC
 A C G T A C G T A T C G A C T G A G T C G T A C A G T C A C G T A C T G G C A T T G A C G C T A A C G T A C G T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C