Information for 12-GCTGCCCACA (Motif 14)

A C T G A G T C A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G A C T G A C T G A G T C C G T A C T A G A G T C
p-value:1e-7
log p-value:-1.715e+01
Information Content per bp:1.963
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif18.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets65.3 +/- 21.7bp
Average Position of motif in Background48.4 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.78
Offset:1
Orientation:forward strand
Alignment:GCTGCCCACA
-CTGCCCGCA
 A C T G A G T C A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GCTGCCCACA
-ATGCCCACC
 A C T G A G T C A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A
A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCTGCCCACA---
-NWAACCACADNN
 A C T G A G T C A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCTGCCCACA---
GGGTGTGCCCAAAAGG
 A C G T A C G T A C G T A C T G A G T C A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCTGCCCACA--
YCCGCCCACGCN
 A C T G A G T C A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C G T A C G T
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCCCACA
TGGGGCCCAC-
 A C G T A C T G A G T C A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCTGCCCACA-----
AGCGGCACACACGCAA
 A C G T A C T G A G T C A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

GCM2/MA0767.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCTGCCCACA--
--TACCCGCATN
 A C T G A G T C A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCTGCCCACA--
--TGCCCAGNHW
 A C T G A G T C A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCTGCCCACA
-ATGCCAACC
 A C T G A G T C A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C