Information for 8-CCCGACTCTGCCA (Motif 13)

A G T C A G T C G T A C A C T G G T C A A G T C A C G T A G T C A C G T A C T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C G T C A A C T G G T C A A C T G A C G T A G T C A C T G A C T G A C T G
p-value:1e-8
log p-value:-1.975e+01
Information Content per bp:1.922
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.4 +/- 20.1bp
Average Position of motif in Background46.1 +/- 8.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:CCCGACTCTGCCA-
--------TGCCAA
 A G T C A G T C G T A C A C T G G T C A A G T C A C G T A G T C A C G T A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.58
Offset:7
Orientation:forward strand
Alignment:CCCGACTCTGCCA--
-------TTGCCAAG
 A G T C A G T C G T A C A C T G G T C A A G T C A C G T A G T C A C G T A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CCCGACTCTGCCA--
------CGTGCCAAG
 A G T C A G T C G T A C A C T G G T C A A G T C A C G T A G T C A C G T A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCCGACTCTGCCA
GCCCCGCCCCCTCCC
 A C G T A C G T A G T C A G T C G T A C A C T G G T C A A G T C A C G T A G T C A C G T A C T G A G T C A G T C C G T A
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CCCGACTCTGCCA---
------GGTGCCAAGT
 A G T C A G T C G T A C A C T G G T C A A G T C A C G T A G T C A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CCCGACTCTGCCA
TGCTGASTCAGC--
 A C G T A G T C A G T C G T A C A C T G G T C A A G T C A C G T A G T C A C G T A C T G A G T C A G T C C G T A
A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CCCGACTCTGCCA---
-------ATGCCAACC
 A G T C A G T C G T A C A C T G G T C A A G T C A C G T A G T C A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CCCGACTCTGCCA---
-------CTGCCCGCA
 A G T C A G T C G T A C A C T G G T C A A G T C A C G T A G T C A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CCCGACTCTGCCA--
-----VGCTGWCAVB
 A G T C A G T C G T A C A C T G G T C A A G T C A C G T A G T C A C G T A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CCCGACTCTGCCA-------
----ACTATGCCAACCTACC
 A G T C A G T C G T A C A C T G G T C A A G T C A C G T A G T C A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C