p-value: | 1e-8 |
log p-value: | -1.926e+01 |
Information Content per bp: | 1.849 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.47% |
Number of Background Sequences with motif | 1.9 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 54.4 +/- 29.9bp |
Average Position of motif in Background | 49.6 +/- 9.0bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.25 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Nkx2-5(var.2)/MA0503.1/Jaspar
Match Rank: | 1 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ACCHACTGAAGGC AGCCACTCAAG-- |
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PB0048.1_Nkx3-1_1/Jaspar
Match Rank: | 2 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ACCHACTGAAGGC- CTTAACCACTTAAGGAT |
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PB0150.1_Mybl1_2/Jaspar
Match Rank: | 3 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --ACCHACTGAAGGC CGACCAACTGCCGTG |
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Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 4 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | ACCHACTGAAGGC MRSCACTYAA--- |
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PH0004.1_Nkx3-2/Jaspar
Match Rank: | 5 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ACCHACTGAAGGC- CATAACCACTTAACAAC |
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Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 6 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ACCHACTGAAGGC AAGCACTTAA--- |
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PH0115.1_Nkx2-6/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --ACCHACTGAAGGC- TAAGCCACTTAACATT |
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Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer
Match Rank: | 8 |
Score: | 0.53 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | ACCHACTGAAGGC -RSCACTYRAG-- |
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THAP1/MA0597.1/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | ACCHACTGAAGGC-- ------TNNGGGCAG |
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PB0149.1_Myb_2/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --ACCHACTGAAGGC- CGACCAACTGCCATGC |
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