Information for 6-CAGGGGTGGCCCG (Motif 10)

A G T C G T C A A T C G A C T G A C T G C A T G A C G T A C T G A T C G A G T C A G T C A G T C C T A G
Reverse Opposite:
A G T C A C T G A C T G A C T G A T G C A G T C G T C A G T A C A G T C A G T C A T G C A C G T A C T G
p-value:1e-9
log p-value:-2.262e+01
Information Content per bp:1.834
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif37.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets42.3 +/- 27.1bp
Average Position of motif in Background51.2 +/- 36.1bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CAGGGGTGGCCCG--
TTGGGGGCGCCCCTAG
 A C G T A G T C G T C A A T C G A C T G A C T G C A T G A C G T A C T G A T C G A G T C A G T C A G T C C T A G A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAGGGGTGGCCCG
CGTGGGTGGTCC-
 A G T C G T C A A T C G A C T G A C T G C A T G A C G T A C T G A T C G A G T C A G T C A G T C C T A G
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CAGGGGTGGCCCG
---GTGGGCCCCA
 A G T C G T C A A T C G A C T G A C T G C A T G A C G T A C T G A T C G A G T C A G T C A G T C C T A G
A C G T A C G T A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CAGGGGTGGCCCG-----
--NNNNTGACCCGGCGCG
 A G T C G T C A A T C G A C T G A C T G C A T G A C G T A C T G A T C G A G T C A G T C A G T C C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

PB0110.1_Bcl6b_2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CAGGGGTGGCCCG
NNTNAGGGGCGGNNNN
 A C G T A C G T A C G T A G T C G T C A A T C G A C T G A C T G C A T G A C G T A C T G A T C G A G T C A G T C A G T C C T A G
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

PB0101.1_Zic1_1/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CAGGGGTGGCCCG
CACCCCCGGGGGGG----
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A A T C G A C T G A C T G C A T G A C G T A C T G A T C G A G T C A G T C A G T C C T A G
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CAGGGGTGGCCCG
CAAAGGCGTGGCCAG
 A C G T A C G T A G T C G T C A A T C G A C T G A C T G C A T G A C G T A C T G A T C G A G T C A G T C A G T C C T A G
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAGGGGTGGCCCG----
-GGGTGTGCCCAAAAGG
 A G T C G T C A A T C G A C T G A C T G C A T G A C G T A C T G A T C G A G T C A G T C A G T C C T A G A C G T A C G T A C G T A C G T
A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CAGGGGTGGCCCG
CCCCCCCGGGGGGGT---
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A A T C G A C T G A C T G C A T G A C G T A C T G A T C G A G T C A G T C A G T C C T A G
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CAGGGGTGGCCCG--
NGTAGGTTGGCATNNN
 A C G T A G T C G T C A A T C G A C T G A C T G C A T G A C G T A C T G A T C G A G T C A G T C A G T C C T A G A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T