Information for 7-GCAGAGAAATGCT (Motif 6)

A T C G G T A C C G T A A C T G C T G A A C T G C G T A C G T A C T G A A C G T A C T G G T A C A C G T
Reverse Opposite:
G T C A A C T G A G T C C G T A A G C T A C G T A C G T A G T C A G C T A G T C A C G T C A T G A T G C
p-value:1e-13
log p-value:-3.131e+01
Information Content per bp:1.874
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.5 +/- 28.3bp
Average Position of motif in Background36.5 +/- 5.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCAGAGAAATGCT
CGGAAGTGAAAC---
 A C G T A C G T A T C G G T A C C G T A A C T G C T G A A C T G C G T A C G T A C T G A A C G T A C T G G T A C A C G T
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCAGAGAAATGCT
AAAGRGGAAGTG--
 A C G T A T C G G T A C C G T A A C T G C T G A A C T G C G T A C G T A C T G A A C G T A C T G G T A C A C G T
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCAGAGAAATGCT
GAAAGTGAAAGT--
 A C G T A T C G G T A C C G T A A C T G C T G A A C T G C G T A C G T A C T G A A C G T A C T G G T A C A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GCAGAGAAATGCT
-AAGGCAAGTGT-
 A T C G G T A C C G T A A C T G C T G A A C T G C G T A C G T A C T G A A C G T A C T G G T A C A C G T
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GCAGAGAAATGCT
-AGAGGAAGTG--
 A T C G G T A C C G T A A C T G C T G A A C T G C G T A C G T A C T G A A C G T A C T G G T A C A C G T
A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCAGAGAAATGCT
GGAAGTGAAAST--
 A C G T A T C G G T A C C G T A A C T G C T G A A C T G C G T A C G T A C T G A A C G T A C T G G T A C A C G T
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GCAGAGAAATGCT
---NTCAAGTGGN
 A T C G G T A C C G T A A C T G C T G A A C T G C G T A C G T A C T G A A C G T A C T G G T A C A C G T
A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GCAGAGAAATGCT-
----TTAAGTGCTT
 A T C G G T A C C G T A A C T G C T G A A C T G C G T A C G T A C T G A A C G T A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

ISL2/MA0914.1/Jaspar

Match Rank:9
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GCAGAGAAATGCT
----TTAAGTGC-
 A T C G G T A C C G T A A C T G C T G A A C T G C G T A C G T A C T G A A C G T A C T G G T A C A C G T
A C G T A C G T A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GCAGAGAAATGCT------
----AAAWWTGCTGACWWD
 A T C G G T A C C G T A A C T G C T G A A C T G C G T A C G T A C T G A A C G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G