p-value: | 1e-16 |
log p-value: | -3.747e+01 |
Information Content per bp: | 1.836 |
Number of Target Sequences with motif | 9.0 |
Percentage of Target Sequences with motif | 1.20% |
Number of Background Sequences with motif | 4.4 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 61.3 +/- 24.9bp |
Average Position of motif in Background | 31.4 +/- 12.8bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
Match Rank: | 1 |
Score: | 0.65 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CTGACATTATTCA- ----GAATATTCAT |
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Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
Match Rank: | 2 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTGACATTATTCA -ATGCATAATTCA |
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Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer
Match Rank: | 3 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CTGACATTATTCA -RGCCATYAATCA |
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Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer
Match Rank: | 4 |
Score: | 0.62 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CTGACATTATTCA-- ---NNATGASTCATH |
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OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
Match Rank: | 5 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTGACATTATTCA- TCATGAATWATTCAT |
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JUND/MA0491.1/Jaspar
Match Rank: | 6 |
Score: | 0.61 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CTGACATTATTCA-- ----NATGAGTCACN |
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BATF::JUN/MA0462.1/Jaspar
Match Rank: | 7 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CTGACATTATTCA --GAAATGACTCA |
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Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
Match Rank: | 8 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CTGACATTATTCA ---TCATCAATCA |
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AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer
Match Rank: | 9 |
Score: | 0.59 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CTGACATTATTCA- ----GATGAGTCAT |
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PB0178.1_Sox8_2/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | CTGACATTATTCA------- ------ACATTCATGACACG |
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