Information for 10-TGCTGGCAAAAAGATA (Motif 19)

A G C T C T A G A G T C C G A T A C T G A T C G A G T C C G T A T C G A C G T A C G T A C T G A C T A G C G T A A G C T C G T A
Reverse Opposite:
A C G T C T G A A C G T A G T C A G C T A C G T A C G T A G C T C G A T A C T G A T G C A G T C C G T A A C T G A G T C C T G A
p-value:1e-11
log p-value:-2.539e+01
Information Content per bp:1.827
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.2 +/- 17.8bp
Average Position of motif in Background72.2 +/- 8.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0186.1_Tcf3_2/Jaspar

Match Rank:1
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TGCTGGCAAAAAGATA--
---AGCCGAAAAAAAAAT
 A G C T C T A G A G T C C G A T A C T G A T C G A G T C C G T A T C G A C G T A C G T A C T G A C T A G C G T A A G C T C G T A A C G T A C G T
A C G T A C G T A C G T C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGCTGGCAAAAAGATA
TACTGGAAAAAAAA--
 A G C T C T A G A G T C C G A T A C T G A T C G A G T C C G T A T C G A C G T A C G T A C T G A C T A G C G T A A G C T C G T A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:TGCTGGCAAAAAGATA----
---------AAGGATATNTN
 A G C T C T A G A G T C C G A T A C T G A T C G A G T C C G T A T C G A C G T A C G T A C T G A C T A G C G T A A G C T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGCTGGCAAAAAGATA
TGCTGACTCA------
 A G C T C T A G A G T C C G A T A C T G A T C G A G T C C G T A T C G A C G T A C G T A C T G A C T A G C G T A A G C T C G T A
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGCTGGCAAAAAGATA
CAATTGCAAAAATAT-
 A G C T C T A G A G T C C G A T A C T G A T C G A G T C C G T A T C G A C G T A C G T A C T G A C T A G C G T A A G C T C G T A
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:6
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----TGCTGGCAAAAAGATA
AAATTTGCTGACTTAGA----
 A C G T A C G T A C G T A C G T A C G T A G C T C T A G A G T C C G A T A C T G A T C G A G T C C G T A T C G A C G T A C G T A C T G A C T A G C G T A A G C T C G T A
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TGCTGGCAAAAAGATA
--TTGCCAAG------
 A G C T C T A G A G T C C G A T A C T G A T C G A G T C C G T A T C G A C G T A C G T A C T G A C T A G C G T A A G C T C G T A
A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

E2F7/MA0758.1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TGCTGGCAAAAAGATA
TTTTCCCGCCAAAA-----
 A C G T A C G T A C G T A G C T C T A G A G T C C G A T A C T G A T C G A G T C C G T A T C G A C G T A C G T A C T G A C T A G C G T A A G C T C G T A
C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TGCTGGCAAAAAGATA
TNNGGGCAG-------
 A G C T C T A G A G T C C G A T A C T G A T C G A G T C C G T A T C G A C G T A C G T A C T G A C T A G C G T A A G C T C G T A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TGCTGGCAAAAAGATA---
NNCCTGNAAAAAAAAAAAAA
 A C G T A G C T C T A G A G T C C G A T A C T G A T C G A G T C C G T A T C G A C G T A C G T A C T G A C T A G C G T A A G C T C G T A A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A