Information for 5-GCCTGATTAA (Motif 7)

A C T G G A T C A G T C A C G T A C T G C G T A A C G T A C G T C G T A C T G A
Reverse Opposite:
A G C T A C G T C G T A C G T A A C G T A G T C C G T A A C T G C A T G A G T C
p-value:1e-9
log p-value:-2.279e+01
Information Content per bp:1.928
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif8.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.0 +/- 23.6bp
Average Position of motif in Background36.8 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LBX1/MA0618.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GCCTGATTAA
--CTAATTAA
 A C T G G A T C A G T C A C G T A C T G C G T A A C G T A C G T C G T A C T G A
A C G T A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A

OTX1/MA0711.1/Jaspar

Match Rank:2
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GCCTGATTAA
--CGGATTAN
 A C T G G A T C A G T C A C G T A C T G C G T A A C G T A C G T C G T A C T G A
A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A

mix-a/MA0621.1/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GCCTGATTAA--
-NCTAATTAANN
 A C T G G A T C A G T C A C G T A C T G C G T A A C G T A C G T C G T A C T G A A C G T A C G T
A C G T G T C A G A T C A C G T C G T A C G T A A C G T A C G T C G T A C T G A G A C T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GCCTGATTAA
AGCTCATTAT
 A C T G G A T C A G T C A C G T A C T G C G T A A C G T A C G T C G T A C T G A
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

GSX1/MA0892.1/Jaspar

Match Rank:5
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GCCTGATTAA-
-CCTAATTAAA
 A C T G G A T C A G T C A C G T A C T G C G T A A C G T A C G T C G T A C T G A A C G T
A C G T G T A C A T G C G A C T G T C A T C G A G C A T G A C T C G T A T C G A G C T A

NKX6-1/MA0674.1/Jaspar

Match Rank:6
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GCCTGATTAA
--GTAATTAA
 A C T G G A T C A G T C A C G T A C T G C G T A A C G T A C G T C G T A C T G A
A C G T A C G T T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:7
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:GCCTGATTAA---
---TGATTGATGA
 A C T G G A T C A G T C A C G T A C T G C G T A A C G T A C G T C G T A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

DUXA/MA0884.1/Jaspar

Match Rank:8
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GCCTGATTAA-----
--NTGATTAAATTAN
 A C T G G A T C A G T C A C G T A C T G C G T A A C G T A C G T C G T A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G

Lhx8/MA0705.1/Jaspar

Match Rank:9
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GCCTGATTAA
--CTAATTAG
 A C T G G A T C A G T C A C G T A C T G C G T A A C G T A C G T C G T A C T G A
A C G T A C G T A G T C A G C T T C G A C G T A A C G T A G C T C T G A T C A G

LHX2/MA0700.1/Jaspar

Match Rank:10
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GCCTGATTAA-
-ACTAATTAAC
 A C T G G A T C A G T C A C G T A C T G C G T A A C G T A C G T C G T A C T G A A C G T
A C G T T C G A A G T C G A C T G T C A C T G A A C G T A C G T C T G A C T G A A T G C