Information for 5-AACGGCAGCGAGGGAR (Motif 13)

G C T A C G T A A G T C T A C G A C T G A T G C C T G A A C T G T A G C A T C G C T G A A C T G A C T G A T C G C G T A C T G A
Reverse Opposite:
A G C T A C G T A T G C T A G C G T A C A G C T A T G C A T C G A G T C A G C T A T C G A G T C A T G C A C T G C G A T C A G T
p-value:1e-8
log p-value:-1.896e+01
Information Content per bp:1.703
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif14.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets48.6 +/- 28.2bp
Average Position of motif in Background45.5 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6/MA0471.1/Jaspar

Match Rank:1
Score:0.59
Offset:7
Orientation:forward strand
Alignment:AACGGCAGCGAGGGAR--
-------GGGCGGGAAGG
 G C T A C G T A A G T C T A C G A C T G A T G C C T G A A C T G T A G C A T C G C T G A A C T G A C T G A T C G C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

POL011.1_XCPE1/Jaspar

Match Rank:2
Score:0.55
Offset:7
Orientation:forward strand
Alignment:AACGGCAGCGAGGGAR-
-------GGGCGGGACC
 G C T A C G T A A G T C T A C G A C T G A T G C C T G A A C T G T A G C A T C G C T G A A C T G A C T G A T C G C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.54
Offset:8
Orientation:forward strand
Alignment:AACGGCAGCGAGGGAR--
--------GGCGGGAARN
 G C T A C G T A A G T C T A C G A C T G A T G C C T G A A C T G T A G C A T C G C T G A A C T G A C T G A T C G C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AACGGCAGCGAGGGAR
---CGGAGC-------
 G C T A C G T A A G T C T A C G A C T G A T G C C T G A A C T G T A G C A T C G C T G A A C T G A C T G A T C G C G T A C T G A
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:5
Score:0.53
Offset:7
Orientation:forward strand
Alignment:AACGGCAGCGAGGGAR--
-------GGGCGGGAAGG
 G C T A C G T A A G T C T A C G A C T G A T G C C T G A A C T G T A G C A T C G C T G A A C T G A C T G A T C G C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

PB0114.1_Egr1_2/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AACGGCAGCGAGGGAR---
---TGCGGAGTGGGACTGG
 G C T A C G T A A G T C T A C G A C T G A T G C C T G A A C T G T A G C A T C G C T G A A C T G A C T G A T C G C G T A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AACGGCAGCGAGGGAR
CACAGCAGGGGG----
 G C T A C G T A A G T C T A C G A C T G A T G C C T G A A C T G T A G C A T C G C T G A A C T G A C T G A T C G C G T A C T G A
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---AACGGCAGCGAGGGAR
ATGTACAGTAGCAAAG---
 A C G T A C G T A C G T G C T A C G T A A G T C T A C G A C T G A T G C C T G A A C T G T A G C A T C G C T G A A C T G A C T G A T C G C G T A C T G A
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AACGGCAGCGAGGGAR
---NGAAGC-------
 G C T A C G T A A G T C T A C G A C T G A T G C C T G A A C T G T A G C A T C G C T G A A C T G A C T G A T C G C G T A C T G A
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---AACGGCAGCGAGGGAR
ATTTACAGTAGCAAAA---
 A C G T A C G T A C G T G C T A C G T A A G T C T A C G A C T G A T G C C T G A A C T G T A G C A T C G C T G A A C T G A C T G A T C G C G T A C T G A
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A A C G T A C G T A C G T