Information for 8-GGWAMCTGCAKGY (Motif 8)

A C T G A C T G C G A T C G T A G T C A A G T C A C G T A C T G A G T C C G T A A C T G C T A G A G T C
Reverse Opposite:
C T A G A G T C G T A C A C G T A C T G A G T C C G T A A C T G A C G T A C G T C G T A A G T C G T A C
p-value:1e-10
log p-value:-2.370e+01
Information Content per bp:1.876
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.6 +/- 20.6bp
Average Position of motif in Background39.1 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM1/MA0646.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGWAMCTGCAKGY
-GTACCCGCATN-
 A C T G A C T G C G A T C G T A G T C A A G T C A C G T A C T G A G T C C G T A A C T G C T A G A G T C
A C G T T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGWAMCTGCAKGY
--DCTCAGCAGG-
 A C T G A C T G C G A T C G T A G T C A A G T C A C G T A C T G A G T C C G T A A C T G C T A G A G T C
A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGWAMCTGCAKGY
SNGCACCTGCHS--
 A C G T A C T G A C T G C G A T C G T A G T C A A G T C A C G T A C T G A G T C C G T A A C T G C T A G A G T C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGWAMCTGCAKGY--
AATCGCACTGCATTCCG
 A C G T A C G T A C T G A C T G C G A T C G T A G T C A A G T C A C G T A C T G A G T C C G T A A C T G C T A G A G T C A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGWAMCTGCAKGY--
GGGTTACTANAGGTCA
 A C G T A C T G A C T G C G A T C G T A G T C A A G T C A C G T A C T G A G T C C G T A A C T G C T A G A G T C A C G T A C G T
C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A

PB0024.1_Gcm1_1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGWAMCTGCAKGY--
TCGTACCCGCATCATT
 A C G T A C T G A C T G C G A T C G T A G T C A A G T C A C G T A C T G A G T C C G T A A C T G C T A G A G T C A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.56
Offset:-10
Orientation:reverse strand
Alignment:----------GGWAMCTGCAKGY
TGGCCANNNNNGGAACTGCA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G A T C G T A G T C A A G T C A C G T A C T G A G T C C G T A A C T G C T A G A G T C
G C A T C T A G C A T G G A T C G A T C C T G A G A T C G C A T A C T G A G C T C A G T C T A G C A T G G C T A C G T A A G T C C G A T C T A G A T G C G C T A A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGWAMCTGCAKGY
-NCACCTGTN---
 A C T G A C T G C G A T C G T A G T C A A G T C A C G T A C T G A G T C C G T A A C T G C T A G A G T C
A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGWAMCTGCAKGY
-GAAAGTGAAAGT
 A C T G A C T G C G A T C G T A G T C A A G T C A C G T A C T G A G T C C G T A A C T G C T A G A G T C
A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

Spz1/MA0111.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGWAMCTGCAKGY
AGGGTAACAGC----
 A C G T A C G T A C T G A C T G C G A T C G T A G T C A A G T C A C G T A C T G A G T C C G T A A C T G C T A G A G T C
C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C A C G T A C G T A C G T A C G T