Information for 6-GCCTGAGGGA (Motif 7)

C A T G A T G C A G T C C G A T C T A G T C G A C A T G C T A G T A C G C G T A
Reverse Opposite:
G C A T A T G C G A T C G T A C A G C T G A T C G C T A T A C G T A C G G T A C
p-value:1e-10
log p-value:-2.381e+01
Information Content per bp:1.684
Number of Target Sequences with motif86.0
Percentage of Target Sequences with motif10.68%
Number of Background Sequences with motif2401.0
Percentage of Background Sequences with motif4.97%
Average Position of motif in Targets48.4 +/- 25.5bp
Average Position of motif in Background50.1 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.3/Jaspar

Match Rank:1
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGAGGGA
NGCCTGAGGCN
 A C G T C A T G A T G C A G T C C G A T C T A G T C G A C A T G C T A G T A C G C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:2
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---GCCTGAGGGA--
ATTGCCTGAGGCAAT
 A C G T A C G T A C G T C A T G A T G C A G T C C G A T C T A G T C G A C A T G C T A G T A C G C G T A A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGAGGGA
TGCCTGAGGCN
 A C G T C A T G A T G C A G T C C G A T C T A G T C G A C A T G C T A G T A C G C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:4
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GCCTGAGGGA
AGCCTCAGGCA
 A C G T C A T G A T G C A G T C C G A T C T A G T C G A C A T G C T A G T A C G C G T A
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.81
Offset:0
Orientation:forward strand
Alignment:GCCTGAGGGA--
SCCTSAGGSCAW
 C A T G A T G C A G T C C G A T C T A G T C G A C A T G C T A G T A C G C G T A A C G T A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:GCCTGAGGGA--
GCCTCAGGGCAT
 C A T G A T G C A G T C C G A T C T A G T C G A C A T G C T A G T A C G C G T A A C G T A C G T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:7
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---GCCTGAGGGA--
ATTGCCTGAGGCGAA
 A C G T A C G T A C G T C A T G A T G C A G T C C G A T C T A G T C G A C A T G C T A G T A C G C G T A A C G T A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:8
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---GCCTGAGGGA--
ATTCCCTGAGGGGAA
 A C G T A C G T A C G T C A T G A T G C A G T C C G A T C T A G T C G A C A T G C T A G T A C G C G T A A C G T A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:9
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---GCCTGAGGGA--
ANTGCCTGAGGCAAN
 A C G T A C G T A C G T C A T G A T G C A G T C C G A T C T A G T C G A C A T G C T A G T A C G C G T A A C G T A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGAGGGA-
TGCCCNGGGGCA
 A C G T C A T G A T G C A G T C C G A T C T A G T C G A C A T G C T A G T A C G C G T A A C G T
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A