Information for 4-CACCTTCTGGCCA (Motif 4)

A T G C G T C A A G T C A G T C A G C T A C G T T G A C G A C T A C T G T A C G A G T C G T A C T G C A
Reverse Opposite:
A C G T C A T G C T A G A T G C T A G C C T G A A C T G T G C A C T G A A C T G C T A G A C G T T A C G
p-value:1e-15
log p-value:-3.633e+01
Information Content per bp:1.704
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.48%
Number of Background Sequences with motif212.9
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets52.8 +/- 21.7bp
Average Position of motif in Background51.4 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.72
Offset:-6
Orientation:reverse strand
Alignment:------CACCTTCTGGCCA
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T C A A G T C A G T C A G C T A C G T T G A C G A C T A C T G T A C G A G T C G T A C T G C A
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.70
Offset:-7
Orientation:forward strand
Alignment:-------CACCTTCTGGCCA
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T C A A G T C A G T C A G C T A C G T T G A C G A C T A C T G T A C G A G T C G T A C T G C A
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CACCTTCTGGCCA
SNGCACCTGCHS----
 A C G T A C G T A C G T A T G C G T C A A G T C A G T C A G C T A C G T T G A C G A C T A C T G T A C G A G T C G T A C T G C A
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.63
Offset:-9
Orientation:forward strand
Alignment:---------CACCTTCTGGCCA
CNNBRGCGCCCCCTGSTGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T C A A G T C A G T C A G C T A C G T T G A C G A C T A C T G T A C G A G T C G T A C T G C A
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CACCTTCTGGCCA
NNCACCTGNN-----
 A C G T A C G T A T G C G T C A A G T C A G T C A G C T A C G T T G A C G A C T A C T G T A C G A G T C G T A C T G C A
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CACCTTCTGGCCA
NCACCTGTN-----
 A C G T A T G C G T C A A G T C A G T C A G C T A C G T T G A C G A C T A C T G T A C G A G T C G T A C T G C A
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CACCTTCTGGCCA
AACACCTGCT-----
 A C G T A C G T A T G C G T C A A G T C A G T C A G C T A C G T T G A C G A C T A C T G T A C G A G T C G T A C T G C A
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CACCTTCTGGCCA
CGCACCTGCT-----
 A C G T A C G T A T G C G T C A A G T C A G T C A G C T A C G T T G A C G A C T A C T G T A C G A G T C G T A C T G C A
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CACCTTCTGGCCA
TGACACCT--------
 A C G T A C G T A C G T A T G C G T C A A G T C A G T C A G C T A C G T T G A C G A C T A C T G T A C G A G T C G T A C T G C A
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CACCTTCTGGCCA
TACACCTGTC-----
 A C G T A C G T A T G C G T C A A G T C A G T C A G C T A C G T T G A C G A C T A C T G T A C G A G T C G T A C T G C A
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T A C G T A C G T A C G T