Information for 5-RSCTGGSTCYCTGCCT (Motif 13)

C T G A A T C G A G T C A C G T A C T G A C T G A T C G A C G T A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A G T C C G T A A C T G C T A G C T A G T G C A A T G C A G T C A G T C C G T A A C T G A T G C A G C T
p-value:1e-8
log p-value:-1.982e+01
Information Content per bp:1.887
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.6 +/- 15.0bp
Average Position of motif in Background40.3 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:RSCTGGSTCYCTGCCT
--CTGGCAGNCTGCCA
 C T G A A T C G A G T C A C G T A C T G A C T G A T C G A C G T A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C G T
A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--RSCTGGSTCYCTGCCT--
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T C T G A A T C G A G T C A C G T A C T G A C T G A T C G A C G T A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:RSCTGGSTCYCTGCCT-
-CTTGGCANNNTGCCAA
 C T G A A T C G A G T C A C G T A C T G A C T G A T C G A C G T A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C G T A C G T
A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:RSCTGGSTCYCTGCCT
--TTGGCATGGTGCCA
 C T G A A T C G A G T C A C G T A C T G A C T G A T C G A C G T A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C G T
A C G T A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-RSCTGGSTCYCTGCCT
CAKCTGKYCYYTTYCCC
 A C G T C T G A A T C G A G T C A C G T A C T G A C T G A T C G A C G T A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C G T
T G A C G C T A A C G T T G A C C G A T A C T G A C T G A G T C A G T C A G T C A G C T A G C T A G C T A G C T G A T C T G A C G T A C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:6
Score:0.52
Offset:4
Orientation:forward strand
Alignment:RSCTGGSTCYCTGCCT
----AGGTCTCTAACC
 C T G A A T C G A G T C A C G T A C T G A C T G A T C G A C G T A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

POL011.1_XCPE1/Jaspar

Match Rank:7
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:RSCTGGSTCYCTGCCT
-----GGTCCCGCCC-
 C T G A A T C G A G T C A C G T A C T G A C T G A T C G A C G T A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:RSCTGGSTCYCTGCCT-
------NNACTTGCCTT
 C T G A A T C G A G T C A C G T A C T G A C T G A T C G A C G T A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:RSCTGGSTCYCTGCCT-
---GGGGCCGAGGCCTG
 C T G A A T C G A G T C A C G T A C T G A C T G A T C G A C G T A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:RSCTGGSTCYCTGCCT
-GCTCGGSCTC-----
 C T G A A T C G A G T C A C G T A C T G A C T G A T C G A C G T A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C G T
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T