Information for 6-AGCCAAGCCACAC (Motif 9)

C G T A C T A G A G T C A G T C G T C A C G T A A T C G A T G C A G T C C G T A A T G C C G T A A G T C
Reverse Opposite:
A C T G A C G T A T C G A C G T A C T G A T C G A T G C A C G T A C G T A C T G A C T G A G T C A C G T
p-value:1e-9
log p-value:-2.171e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 26.8bp
Average Position of motif in Background53.3 +/- 17.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGCCAAGCCACAC---
TGCCAAAATAAACANN
 C G T A C T A G A G T C A G T C G T C A C G T A A T C G A T G C A G T C C G T A A T G C C G T A A G T C A C G T A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGCCAAGCCACAC
-TCCAATCCACA-
 C G T A C T A G A G T C A G T C G T C A C G T A A T C G A T G C A G T C C G T A A T G C C G T A A G T C
A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AGCCAAGCCACAC--
----AAACCACAGAN
 C G T A C T A G A G T C A G T C G T C A C G T A A T C G A T G C A G T C C G T A A T G C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGCCAAGCCACAC-
--SSAATCCACANN
 C G T A C T A G A G T C A G T C G T C A C G T A A T C G A T G C A G T C C G T A A T G C C G T A A G T C A C G T
A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AGCCAAGCCACAC-
----AAACCACANN
 C G T A C T A G A G T C A G T C G T C A C G T A A T C G A T G C A G T C C G T A A T G C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AGCCAAGCCACAC-
----ATGCCAGACN
 C G T A C T A G A G T C A G T C G T C A C G T A A T C G A T G C A G T C C G T A A T G C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.60
Offset:6
Orientation:forward strand
Alignment:AGCCAAGCCACAC---
------GCCACACCCA
 C G T A C T A G A G T C A G T C G T C A C G T A A T C G A T G C A G T C C G T A A T G C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:8
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:AGCCAAGCCACAC----
-----GGCCACACCCAN
 C G T A C T A G A G T C A G T C G T C A C G T A A T C G A T G C A G T C C G T A A T G C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGCCAAGCCACAC--
---NWAACCACADNN
 C G T A C T A G A G T C A G T C G T C A C G T A A T C G A T G C A G T C C G T A A T G C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGCCAAGCCACAC
---NAAACCACAG
 C G T A C T A G A G T C A G T C G T C A C G T A A T C G A T G C A G T C C G T A A T G C C G T A A G T C
A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G