Information for 6-GCCTCATGGACTC (Motif 9)

A C T G A G T C A G T C A G C T A G T C C G T A A C G T C T A G A C T G C G T A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T A G T C A G T C C G T A A C G T A C T G C T G A C T A G C T A G A G T C
p-value:1e-9
log p-value:-2.193e+01
Information Content per bp:1.937
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.5 +/- 40.3bp
Average Position of motif in Background68.9 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCCTCATGGACTC
GCCTCAGGGCAT-
 A C T G A G T C A G T C A G C T A G T C C G T A A C G T C T A G A C T G C G T A A G T C A C G T A G T C
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCCTCATGGACTC-----
--NNATTGGACTTTNGNN
 A C T G A G T C A G T C A G C T A G T C C G T A A C G T C T A G A C T G C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:3
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GCCTCATGGACTC
NTCGCCTCAGGCAAT-
 A C G T A C G T A C G T A C T G A G T C A G T C A G C T A G T C C G T A A C G T C T A G A C T G C G T A A G T C A C G T A G T C
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GCCTCATGGACTC
NTCCCCTCAGGGANT-
 A C G T A C G T A C G T A C T G A G T C A G T C A G C T A G T C C G T A A C G T C T A G A C T G C G T A A G T C A C G T A G T C
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T A C G T

Myc/MA0147.2/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCCTCATGGACTC
AAGCACATGG----
 A C G T A C T G A G T C A G T C A G C T A G T C C G T A A C G T C T A G A C T G C G T A A G T C A C G T A G T C
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCCTCATGGACTC
SCCTSAGGSCAW-
 A C T G A G T C A G T C A G C T A G T C C G T A A C G T C T A G A C T G C G T A A G T C A C G T A G T C
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GCCTCATGGACTC-------
---TACGAGACTCCTCTAAC
 A C T G A G T C A G T C A G C T A G T C C G T A A C G T C T A G A C T G C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GCCTCATGGACTC
NTNGCCTCAGGCNNN-
 A C G T A C G T A C G T A C T G A G T C A G T C A G C T A G T C C G T A A C G T C T A G A C T G C G T A A G T C A C G T A G T C
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCCTCATGGACTC
--NTCAAGGTCA-
 A C T G A G T C A G T C A G C T A G T C C G T A A C G T C T A G A C T G C G T A A G T C A C G T A G T C
A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GCCTCATGGACTC
CGCCTCAGGCA---
 A C G T A C T G A G T C A G T C A G C T A G T C C G T A A C G T C T A G A C T G C G T A A G T C A C G T A G T C
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T