Information for 9-MCARCCTGTTCTGYGG (Motif 8)

G T A C A G T C G T C A T C G A G T A C G T A C A C G T A T C G G A C T A C G T A G T C A C G T A C T G A G T C A C T G C T A G
Reverse Opposite:
A G T C G T A C C T A G A G T C C G T A C T A G G T C A C T G A A T G C G T C A A C T G A C T G A G C T A C G T C T A G A C T G
p-value:1e-10
log p-value:-2.309e+01
Information Content per bp:1.765
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.0 +/- 29.1bp
Average Position of motif in Background51.2 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--MCARCCTGTTCTGYGG
GVACAGNMTGTYCTB---
 A C G T A C G T G T A C A G T C G T C A T C G A G T A C G T A C A C G T A T C G G A C T A C G T A G T C A C G T A C T G A G T C A C T G C T A G
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G A C G T A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--MCARCCTGTTCTGYGG
GRACAGWMTGTYCTB---
 A C G T A C G T G T A C A G T C G T C A T C G A G T A C G T A C A C G T A T C G G A C T A C G T A G T C A C G T A C T G A G T C A C T G C T A G
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G A C G T A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--MCARCCTGTTCTGYGG
GAACADWATGTTCTT---
 A C G T A C G T G T A C A G T C G T C A T C G A G T A C G T A C A C G T A T C G G A C T A C G T A G T C A C G T A C T G A G T C A C T G C T A G
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T A C G T A C G T A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---MCARCCTGTTCTGYGG
AGNACAGNCTGTTCTN---
 A C G T A C G T A C G T G T A C A G T C G T C A T C G A G T A C G T A C A C G T A T C G G A C T A C G T A G T C A C G T A C T G A G T C A C T G C T A G
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.55
Offset:8
Orientation:forward strand
Alignment:MCARCCTGTTCTGYGG---
--------GTCTGTGGTTT
 G T A C A G T C G T C A T C G A G T A C G T A C A C G T A T C G G A C T A C G T A G T C A C G T A C T G A G T C A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---MCARCCTGTTCTGYGG
AGNACANNNTGTNCTN---
 A C G T A C G T A C G T G T A C A G T C G T C A T C G A G T A C G T A C A C G T A T C G G A C T A C G T A G T C A C G T A C T G A G T C A C T G C T A G
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C A C G T A C G T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:MCARCCTGTTCTGYGG
NAAACCGGTTTT----
 G T A C A G T C G T C A T C G A G T A C G T A C A C G T A T C G G A C T A C G T A G T C A C G T A C T G A G T C A C T G C T A G
G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:MCARCCTGTTCTGYGG---
---------TTTGCGGTTT
 G T A C A G T C G T C A T C G A G T A C G T A C A C G T A T C G G A C T A C G T A G T C A C G T A C T G A G T C A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:MCARCCTGTTCTGYGG----
--------NNHTGTGGTTWN
 G T A C A G T C G T C A T C G A G T A C G T A C A C G T A T C G G A C T A C G T A G T C A C G T A C T G A G T C A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:MCARCCTGTTCTGYGG
-CCCCCTGCTGTG---
 G T A C A G T C G T C A T C G A G T A C G T A C A C G T A T C G G A C T A C G T A G T C A C G T A C T G A G T C A C T G C T A G
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T