Information for 5-ATGACRYASKTSY (Motif 6)

C T G A A C G T A C T G C G T A A G T C C T A G A G T C C G T A A T G C A C G T A C G T A T G C A G T C
Reverse Opposite:
C T A G A T C G C G T A G T C A A T C G A C G T C T A G A G T C A C T G A C G T A G T C C G T A A G C T
p-value:1e-10
log p-value:-2.515e+01
Information Content per bp:1.828
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif18.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets62.4 +/- 16.7bp
Average Position of motif in Background49.8 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf1/MA0604.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:ATGACRYASKTSY
ATGACGTA-----
 C T G A A C G T A C T G C G T A A G T C C T A G A G T C C G T A A T G C A C G T A C G T A T G C A G T C
T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A A C G T A C G T A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-ATGACRYASKTSY
CATGAC--------
 A C G T C T G A A C G T A C T G C G T A A G T C C T A G A G T C C G T A A T G C A C G T A C G T A T G C A G T C
T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Atf3/MA0605.1/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-ATGACRYASKTSY
GATGACGT------
 A C G T C T G A A C G T A C T G C G T A A G T C C T A G A G T C C G T A A T G C A C G T A C G T A T G C A G T C
A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:4
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:ATGACRYASKTSY
-TGACCTARTT--
 C T G A A C G T A C T G C G T A A G T C C T A G A G T C C G T A A T G C A C G T A C G T A T G C A G T C
A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T

Crem/MA0609.1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ATGACRYASKTSY
TATGACGTAA----
 A C G T C T G A A C G T A C T G C G T A A G T C C T A G A G T C C G T A A T G C A C G T A C G T A T G C A G T C
A C G T C T G A A C G T A C T G C G T A A G T C A C T G A C G T G T C A C G T A A C G T A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ATGACRYASKTSY-
TTGACCTANTTATN
 C T G A A C G T A C T G C G T A A G T C C T A G A G T C C G T A A T G C A C G T A C G T A T G C A G T C A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ATGACRYASKTSY
-TGACGT------
 C T G A A C G T A C T G C G T A A G T C C T A G A G T C C G T A A T G C A C G T A C G T A T G C A G T C
A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATGACRYASKTSY
TTGACAG------
 C T G A A C G T A C T G C G T A A G T C C T A G A G T C C G T A A T G C A C G T A C G T A T G C A G T C
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

JDP2/MA0655.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATGACRYASKTSY
ATGACTCAT----
 C T G A A C G T A C T G C G T A A G T C C T A G A G T C C G T A A T G C A C G T A C G T A T G C A G T C
T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T A C G T A C G T A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ATGACRYASKTSY
-TGACTCA-----
 C T G A A C G T A C T G C G T A A G T C C T A G A G T C C G T A A T G C A C G T A C G T A T G C A G T C
A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T A C G T A C G T A C G T