Information for 17-ATGTTAATAC (Motif 37)

C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C G T A C G T C G T A C G T A A G T C C G T A A C G T
p-value:1e-3
log p-value:-7.881e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.2 +/- 26.5bp
Average Position of motif in Background74.1 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXB1/MA0845.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-ATGTTAATAC
TATGTAAATAT
 A C G T C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-ATGTTAATAC-
TATGCWAATBAV
 A C G T C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C A C G T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

POU5F1B/MA0792.1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ATGTTAATAC
TATGCAAAT--
 A C G T C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ATGTTAATAC
TATGCAAAT--
 A C G T C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C
G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ATGTTAATAC-
ATATTAATTAA
 C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C A C G T
C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

POU3F1/MA0786.1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ATGTTAATAC
TTATGCAAATTA
 A C G T A C G T C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

POU2F1/MA0785.1/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ATGTTAATAC
AATATGCAAATT-
 A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T

PB0109.1_Bbx_2/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ATGTTAATAC----
TGATTGTTAACAGTTGG
 A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

FOXC1/MA0032.2/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ATGTTAATAC
TATGTAAATAT
 A C G T C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T

PH0137.1_Pitx1/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ATGTTAATAC------
NTTGTTAATCCCTCTNN
 A C G T C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A