Information for 12-GACGTGAYWA (Motif 34)

A C T G C G T A A G T C A T C G A C G T A C T G C G T A A G T C C G A T C G T A
Reverse Opposite:
A C G T C G T A C T A G A C G T A G T C C G T A A T G C A C T G A C G T A G T C
p-value:1e-5
log p-value:-1.257e+01
Information Content per bp:1.905
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.2 +/- 22.5bp
Average Position of motif in Background30.1 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arntl/MA0603.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GACGTGAYWA
NCACGTGACN-
 A C G T A C T G C G T A A G T C A T C G A C G T A C T G C G T A A G T C C G A T C G T A
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T

Pax2/MA0067.1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GACGTGAYWA
-NCGTGACN-
 A C T G C G T A A G T C A T C G A C G T A C T G C G T A A G T C C G A T C G T A
A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:3
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GACGTGAYWA
GGGTACGTGC---
 A C G T A C G T A C G T A C T G C G T A A G T C A T C G A C G T A C T G C G T A A G T C C G A T C G T A
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GACGTGAYWA
TACGTGCV--
 A C T G C G T A A G T C A T C G A C G T A C T G C G T A A G T C C G A T C G T A
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GACGTGAYWA
GGACGTGC---
 A C G T A C T G C G T A A G T C A T C G A C G T A C T G C G T A A G T C C G A T C G T A
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:6
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GACGTGAYWA
RTACGTGC---
 A C G T A C T G C G T A A G T C A T C G A C G T A C T G C G T A A G T C C G A T C G T A
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T

BHLHE41/MA0636.1/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GACGTGAYWA
GTCACGTGAC--
 A C G T A C G T A C T G C G T A A G T C A T C G A C G T A C T G C G T A A G T C C G A T C G T A
T C A G C A G T T A G C T C G A A G T C T C A G C G A T T A C G G T C A A G T C A C G T A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:8
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GACGTGAYWA
CGGTGACGTCAC--
 A C G T A C G T A C G T A C G T A C T G C G T A A G T C A T C G A C G T A C T G C G T A A G T C C G A T C G T A
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C A C G T A C G T

CREB1/MA0018.2/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GACGTGAYWA
TGACGTCA---
 A C G T A C T G C G T A A G T C A T C G A C G T A C T G C G T A A G T C C G A T C G T A
A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A A C G T A C G T A C G T

MLX/MA0663.1/Jaspar

Match Rank:10
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GACGTGAYWA
ATCACGTGAT--
 A C G T A C G T A C T G C G T A A G T C A T C G A C G T A C T G C G T A A G T C C G A T C G T A
C T G A A C G T A G T C C T G A A G T C C A T G C G A T C A T G C T G A G A C T A C G T A C G T